Gene : Bradi2g54600 B. distachyon v3.1
Defline:  (1 of 3) PTHR10114 - 60S RIBOSOMAL PROTEIN L36 Genomic Order:  6567
Name:  ? Bradi2g54600 Secondary Identifier:  ? PAC:32782117
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g54600 0.5kb upstream 0.5kb upstream 2725 true Bd2: 53246759-53249483 Brachypodium distachyon
Bradi2g54600 0.5kb upstream 0.5kb upstream 500 false Bd2: 53248984-53249483 Brachypodium distachyon
Bradi2g54600 0.5kb downstream 0.5kb downstream 2725 true Bd2: 53246259-53248983 Brachypodium distachyon
Bradi2g54600 0.5kb downstream 0.5kb downstream 500 false Bd2: 53246259-53246758 Brachypodium distachyon
Bradi2g54600 1.0kb upstream 1.0kb upstream 3225 true Bd2: 53246759-53249983 Brachypodium distachyon
Bradi2g54600 1.0kb upstream 1.0kb upstream 1000 false Bd2: 53248984-53249983 Brachypodium distachyon
Bradi2g54600 1.0kb downstream 1.0kb downstream 3225 true Bd2: 53245759-53248983 Brachypodium distachyon
Bradi2g54600 1.0kb downstream 1.0kb downstream 1000 false Bd2: 53245759-53246758 Brachypodium distachyon
Bradi2g54600 2.0kb upstream 2.0kb upstream 4225 true Bd2: 53246759-53250983 Brachypodium distachyon
Bradi2g54600 2.0kb upstream 2.0kb upstream 2000 false Bd2: 53248984-53250983 Brachypodium distachyon
Bradi2g54600 2.0kb downstream 2.0kb downstream 4225 true Bd2: 53244759-53248983 Brachypodium distachyon
Bradi2g54600 2.0kb downstream 2.0kb downstream 2000 false Bd2: 53244759-53246758 Brachypodium distachyon
Bradi2g54600 5.0kb upstream 5.0kb upstream 7225 true Bd2: 53246759-53253983 Brachypodium distachyon
Bradi2g54600 5.0kb upstream 5.0kb upstream 5000 false Bd2: 53248984-53253983 Brachypodium distachyon
Bradi2g54600 5.0kb downstream 5.0kb downstream 7225 true Bd2: 53241759-53248983 Brachypodium distachyon
Bradi2g54600 5.0kb downstream 5.0kb downstream 5000 false Bd2: 53241759-53246758 Brachypodium distachyon
Bradi2g54600 10.0kb upstream 10.0kb upstream 12225 true Bd2: 53246759-53258983 Brachypodium distachyon
Bradi2g54600 10.0kb upstream 10.0kb upstream 10000 false Bd2: 53248984-53258983 Brachypodium distachyon
Bradi2g54600 10.0kb downstream 10.0kb downstream 12225 true Bd2: 53236759-53248983 Brachypodium distachyon
Bradi2g54600 10.0kb downstream 10.0kb downstream 10000 false Bd2: 53236759-53246758 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585662 5269 Grass View MSA
122049276 5273 Angiosperm View MSA
121349373 5274 Embryophyte View MSA
123424507 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.85     High  
cufflinks 26.266     High  
cufflinks 19.069     High  
cufflinks 37.149     High High
cufflinks 14.755     High  
cufflinks 23.088     High  
cufflinks 23.812     High  
cufflinks 16.807     High  
cufflinks 21.444     High  
cufflinks 30.707     High  
cufflinks 5.108       Low
cufflinks 17.268     High  
cufflinks 3.289       Low
cufflinks 5.832       Low
cufflinks 13.584     High  
cufflinks 19.618     High  
cufflinks 30.611     High  
cufflinks 34.98     High  
cufflinks 20.492     High  
cufflinks 15.753     High  
cufflinks 38.253     High High
cufflinks 14.388     High  
cufflinks 15.569     High  
cufflinks 18.557     High  
cufflinks 30.54     High  
cufflinks 26.594     High  
cufflinks 5.573       Low
cufflinks 21.064     High  
cufflinks 18.554     High  
cufflinks 33.821     High  

0 Strain