Gene : Bradi2g55110 B. distachyon v3.1
Defline:  (1 of 1) K09591 - steroid 5-alpha-reductase (DET2) Genomic Order:  6633
Name:  ? Bradi2g55110 Secondary Identifier:  ? PAC:32775923
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g55110 0.5kb upstream 0.5kb upstream 1899 true Bd2: 53605012-53606910 Brachypodium distachyon
Bradi2g55110 0.5kb upstream 0.5kb upstream 500 false Bd2: 53605012-53605511 Brachypodium distachyon
Bradi2g55110 0.5kb downstream 0.5kb downstream 1899 true Bd2: 53605512-53607410 Brachypodium distachyon
Bradi2g55110 0.5kb downstream 0.5kb downstream 500 false Bd2: 53606911-53607410 Brachypodium distachyon
Bradi2g55110 1.0kb upstream 1.0kb upstream 2399 true Bd2: 53604512-53606910 Brachypodium distachyon
Bradi2g55110 1.0kb upstream 1.0kb upstream 1000 false Bd2: 53604512-53605511 Brachypodium distachyon
Bradi2g55110 1.0kb downstream 1.0kb downstream 2399 true Bd2: 53605512-53607910 Brachypodium distachyon
Bradi2g55110 1.0kb downstream 1.0kb downstream 1000 false Bd2: 53606911-53607910 Brachypodium distachyon
Bradi2g55110 2.0kb upstream 2.0kb upstream 3399 true Bd2: 53603512-53606910 Brachypodium distachyon
Bradi2g55110 2.0kb upstream 2.0kb upstream 2000 false Bd2: 53603512-53605511 Brachypodium distachyon
Bradi2g55110 2.0kb downstream 2.0kb downstream 3399 true Bd2: 53605512-53608910 Brachypodium distachyon
Bradi2g55110 2.0kb downstream 2.0kb downstream 2000 false Bd2: 53606911-53608910 Brachypodium distachyon
Bradi2g55110 5.0kb upstream 5.0kb upstream 6399 true Bd2: 53600512-53606910 Brachypodium distachyon
Bradi2g55110 5.0kb upstream 5.0kb upstream 5000 false Bd2: 53600512-53605511 Brachypodium distachyon
Bradi2g55110 5.0kb downstream 5.0kb downstream 6399 true Bd2: 53605512-53611910 Brachypodium distachyon
Bradi2g55110 5.0kb downstream 5.0kb downstream 5000 false Bd2: 53606911-53611910 Brachypodium distachyon
Bradi2g55110 10.0kb upstream 10.0kb upstream 11399 true Bd2: 53595512-53606910 Brachypodium distachyon
Bradi2g55110 10.0kb upstream 10.0kb upstream 10000 false Bd2: 53595512-53605511 Brachypodium distachyon
Bradi2g55110 10.0kb downstream 10.0kb downstream 11399 true Bd2: 53605512-53616910 Brachypodium distachyon
Bradi2g55110 10.0kb downstream 10.0kb downstream 10000 false Bd2: 53606911-53616910 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577414 5269 Grass View MSA
122045974 5273 Angiosperm View MSA
121350714 5274 Embryophyte View MSA
123428210 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.175       Low
cufflinks 0.251        
cufflinks 0.467        
cufflinks 0.316        
cufflinks 0.232        
cufflinks 0.24        
cufflinks 0.634        
cufflinks 0.346        
cufflinks 0.431        
cufflinks 0.572        
cufflinks 0.156       Low
cufflinks 0.194        
cufflinks 0.211        
cufflinks 0.24        
cufflinks 0.273        
cufflinks 0.328        
cufflinks 0.684        
cufflinks 1.31       High
cufflinks 0.95       High
cufflinks 0.25        
cufflinks 1.625       High
cufflinks 0.315        
cufflinks 0.281        
cufflinks 0.291        
cufflinks 0.366        
cufflinks 0.277        
cufflinks 0.264        
cufflinks 0.595        
cufflinks 0.35        
cufflinks 0.64        

0 Strain