Gene : Bradi2g55440 B. distachyon v3.1
Defline:  (1 of 1) PTHR11119//PTHR11119:SF28 - XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER // NUCLEOBASE-ASCORBATE TRANSPORTER 12 Genomic Order:  6675
Name:  ? Bradi2g55440 Secondary Identifier:  ? PAC:32771512
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g55440 0.5kb upstream 0.5kb upstream 5979 true Bd2: 53855869-53861847 Brachypodium distachyon
Bradi2g55440 0.5kb upstream 0.5kb upstream 500 false Bd2: 53855869-53856368 Brachypodium distachyon
Bradi2g55440 0.5kb downstream 0.5kb downstream 5979 true Bd2: 53856369-53862347 Brachypodium distachyon
Bradi2g55440 0.5kb downstream 0.5kb downstream 500 false Bd2: 53861848-53862347 Brachypodium distachyon
Bradi2g55440 1.0kb upstream 1.0kb upstream 6479 true Bd2: 53855369-53861847 Brachypodium distachyon
Bradi2g55440 1.0kb upstream 1.0kb upstream 1000 false Bd2: 53855369-53856368 Brachypodium distachyon
Bradi2g55440 1.0kb downstream 1.0kb downstream 6479 true Bd2: 53856369-53862847 Brachypodium distachyon
Bradi2g55440 1.0kb downstream 1.0kb downstream 1000 false Bd2: 53861848-53862847 Brachypodium distachyon
Bradi2g55440 2.0kb upstream 2.0kb upstream 7479 true Bd2: 53854369-53861847 Brachypodium distachyon
Bradi2g55440 2.0kb upstream 2.0kb upstream 2000 false Bd2: 53854369-53856368 Brachypodium distachyon
Bradi2g55440 2.0kb downstream 2.0kb downstream 7479 true Bd2: 53856369-53863847 Brachypodium distachyon
Bradi2g55440 2.0kb downstream 2.0kb downstream 2000 false Bd2: 53861848-53863847 Brachypodium distachyon
Bradi2g55440 5.0kb upstream 5.0kb upstream 10479 true Bd2: 53851369-53861847 Brachypodium distachyon
Bradi2g55440 5.0kb upstream 5.0kb upstream 5000 false Bd2: 53851369-53856368 Brachypodium distachyon
Bradi2g55440 5.0kb downstream 5.0kb downstream 10479 true Bd2: 53856369-53866847 Brachypodium distachyon
Bradi2g55440 5.0kb downstream 5.0kb downstream 5000 false Bd2: 53861848-53866847 Brachypodium distachyon
Bradi2g55440 10.0kb upstream 10.0kb upstream 15479 true Bd2: 53846369-53861847 Brachypodium distachyon
Bradi2g55440 10.0kb upstream 10.0kb upstream 10000 false Bd2: 53846369-53856368 Brachypodium distachyon
Bradi2g55440 10.0kb downstream 10.0kb downstream 15479 true Bd2: 53856369-53871847 Brachypodium distachyon
Bradi2g55440 10.0kb downstream 10.0kb downstream 10000 false Bd2: 53861848-53871847 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581413 5269 Grass View MSA
122046196 5273 Angiosperm View MSA
121347942 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.443        
cufflinks 1.457        
cufflinks 1.376        
cufflinks 1.089        
cufflinks 0.225        
cufflinks 1.012        
cufflinks 1.112        
cufflinks 0.726        
cufflinks 0.851        
cufflinks 0.586        
cufflinks 0.037     Low Low
cufflinks 0.739        
cufflinks 0.072       Low
cufflinks 0.015     Low Low
cufflinks 0.12       Low
cufflinks 1.072        
cufflinks 1.089        
cufflinks 1.736        
cufflinks 0.863        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.151        
cufflinks 0.967        
cufflinks 0.691        
cufflinks 0.576        
cufflinks 0.857        
cufflinks 0.944        
cufflinks 0.082     Low Low
cufflinks 0.703        
cufflinks 0.828        
cufflinks 1.471        

0 Strain