Gene : Bradi2g55351 B. distachyon v3.1
Defline:  (1 of 1) PTHR12084 - NUCLEAR PORE GLYCOPROTEIN P62-RELATED Genomic Order:  6667
Name:  ? Bradi2g55351 Secondary Identifier:  ? PAC:32774400
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g55351 0.5kb upstream 0.5kb upstream 10308 true Bd2: 53802853-53813160 Brachypodium distachyon
Bradi2g55351 0.5kb upstream 0.5kb upstream 500 false Bd2: 53812661-53813160 Brachypodium distachyon
Bradi2g55351 0.5kb downstream 0.5kb downstream 10308 true Bd2: 53802353-53812660 Brachypodium distachyon
Bradi2g55351 0.5kb downstream 0.5kb downstream 500 false Bd2: 53802353-53802852 Brachypodium distachyon
Bradi2g55351 1.0kb upstream 1.0kb upstream 10808 true Bd2: 53802853-53813660 Brachypodium distachyon
Bradi2g55351 1.0kb upstream 1.0kb upstream 1000 false Bd2: 53812661-53813660 Brachypodium distachyon
Bradi2g55351 1.0kb downstream 1.0kb downstream 10808 true Bd2: 53801853-53812660 Brachypodium distachyon
Bradi2g55351 1.0kb downstream 1.0kb downstream 1000 false Bd2: 53801853-53802852 Brachypodium distachyon
Bradi2g55351 2.0kb upstream 2.0kb upstream 11808 true Bd2: 53802853-53814660 Brachypodium distachyon
Bradi2g55351 2.0kb upstream 2.0kb upstream 2000 false Bd2: 53812661-53814660 Brachypodium distachyon
Bradi2g55351 2.0kb downstream 2.0kb downstream 11808 true Bd2: 53800853-53812660 Brachypodium distachyon
Bradi2g55351 2.0kb downstream 2.0kb downstream 2000 false Bd2: 53800853-53802852 Brachypodium distachyon
Bradi2g55351 5.0kb upstream 5.0kb upstream 14808 true Bd2: 53802853-53817660 Brachypodium distachyon
Bradi2g55351 5.0kb upstream 5.0kb upstream 5000 false Bd2: 53812661-53817660 Brachypodium distachyon
Bradi2g55351 5.0kb downstream 5.0kb downstream 14808 true Bd2: 53797853-53812660 Brachypodium distachyon
Bradi2g55351 5.0kb downstream 5.0kb downstream 5000 false Bd2: 53797853-53802852 Brachypodium distachyon
Bradi2g55351 10.0kb upstream 10.0kb upstream 19808 true Bd2: 53802853-53822660 Brachypodium distachyon
Bradi2g55351 10.0kb upstream 10.0kb upstream 10000 false Bd2: 53812661-53822660 Brachypodium distachyon
Bradi2g55351 10.0kb downstream 10.0kb downstream 19808 true Bd2: 53792853-53812660 Brachypodium distachyon
Bradi2g55351 10.0kb downstream 10.0kb downstream 10000 false Bd2: 53792853-53802852 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582185 5269 Grass View MSA
122044271 5273 Angiosperm View MSA
121348594 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.674        
cufflinks 1.074        
cufflinks 1.031        
cufflinks 0.715        
cufflinks 0.252       Low
cufflinks 0.895        
cufflinks 1.002        
cufflinks 0.775        
cufflinks 0.665        
cufflinks 0.52        
cufflinks 0.457        
cufflinks 0.626        
cufflinks 0.261       Low
cufflinks 0.303        
cufflinks 0.265       Low
cufflinks 0.962        
cufflinks 0.577        
cufflinks 1.982       High
cufflinks 0.723        
cufflinks 0.117     Low Low
cufflinks 0.823        
cufflinks 0.863        
cufflinks 0.651        
cufflinks 0.518        
cufflinks 0.645        
cufflinks 0.763        
cufflinks 0.336        
cufflinks 0.797        
cufflinks 0.712        
cufflinks 0.884        

0 Strain