Gene : Bradi2g56160 B. distachyon v3.1
Defline:  (1 of 1) K02320 - DNA polymerase alpha subunit A (POLA1) Genomic Order:  6759
Name:  ? Bradi2g56160 Secondary Identifier:  ? PAC:32780705
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g56160 0.5kb upstream 0.5kb upstream 10591 true Bd2: 54359683-54370273 Brachypodium distachyon
Bradi2g56160 0.5kb upstream 0.5kb upstream 500 false Bd2: 54369774-54370273 Brachypodium distachyon
Bradi2g56160 0.5kb downstream 0.5kb downstream 10591 true Bd2: 54359183-54369773 Brachypodium distachyon
Bradi2g56160 0.5kb downstream 0.5kb downstream 500 false Bd2: 54359183-54359682 Brachypodium distachyon
Bradi2g56160 1.0kb upstream 1.0kb upstream 11091 true Bd2: 54359683-54370773 Brachypodium distachyon
Bradi2g56160 1.0kb upstream 1.0kb upstream 1000 false Bd2: 54369774-54370773 Brachypodium distachyon
Bradi2g56160 1.0kb downstream 1.0kb downstream 11091 true Bd2: 54358683-54369773 Brachypodium distachyon
Bradi2g56160 1.0kb downstream 1.0kb downstream 1000 false Bd2: 54358683-54359682 Brachypodium distachyon
Bradi2g56160 2.0kb upstream 2.0kb upstream 12091 true Bd2: 54359683-54371773 Brachypodium distachyon
Bradi2g56160 2.0kb upstream 2.0kb upstream 2000 false Bd2: 54369774-54371773 Brachypodium distachyon
Bradi2g56160 2.0kb downstream 2.0kb downstream 12091 true Bd2: 54357683-54369773 Brachypodium distachyon
Bradi2g56160 2.0kb downstream 2.0kb downstream 2000 false Bd2: 54357683-54359682 Brachypodium distachyon
Bradi2g56160 5.0kb upstream 5.0kb upstream 15091 true Bd2: 54359683-54374773 Brachypodium distachyon
Bradi2g56160 5.0kb upstream 5.0kb upstream 5000 false Bd2: 54369774-54374773 Brachypodium distachyon
Bradi2g56160 5.0kb downstream 5.0kb downstream 15091 true Bd2: 54354683-54369773 Brachypodium distachyon
Bradi2g56160 5.0kb downstream 5.0kb downstream 5000 false Bd2: 54354683-54359682 Brachypodium distachyon
Bradi2g56160 10.0kb upstream 10.0kb upstream 20091 true Bd2: 54359683-54379773 Brachypodium distachyon
Bradi2g56160 10.0kb upstream 10.0kb upstream 10000 false Bd2: 54369774-54379773 Brachypodium distachyon
Bradi2g56160 10.0kb downstream 10.0kb downstream 20091 true Bd2: 54349683-54369773 Brachypodium distachyon
Bradi2g56160 10.0kb downstream 10.0kb downstream 10000 false Bd2: 54349683-54359682 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575248 5269 Grass View MSA
122042985 5273 Angiosperm View MSA
121344859 5274 Embryophyte View MSA
123423980 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.894        
cufflinks 2.116        
cufflinks 1.704        
cufflinks 1.557        
cufflinks 0.212       Low
cufflinks 1.947        
cufflinks 1.534        
cufflinks 1.653        
cufflinks 2.08        
cufflinks 0.801        
cufflinks 0.157       Low
cufflinks 1.506        
cufflinks 0.116       Low
cufflinks 0.088       Low
cufflinks 0.223        
cufflinks 1.767        
cufflinks 0.918        
cufflinks 2.834       High
cufflinks 0.432        
cufflinks 0.331        
cufflinks 0.551        
cufflinks 1.971        
cufflinks 1.341        
cufflinks 1.295        
cufflinks 1.395        
cufflinks 1.385        
cufflinks 0.155       Low
cufflinks 1.137        
cufflinks 1.197        
cufflinks 1.765        

0 Strain