Gene : Bradi2g61090 B. distachyon v3.1
Defline:  (1 of 1) PTHR30543//PTHR30543:SF5 - CHROMATE REDUCTASE Genomic Order:  7409
Name:  ? Bradi2g61090 Secondary Identifier:  ? PAC:32775338
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-3781 Brachypodium distachyon pathologic  
Bdistachyon PWY-4302 Brachypodium distachyon pathologic  
Bdistachyon PWY-5083 Brachypodium distachyon pathologic  
Bdistachyon PWY-7279 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g61090 0.5kb upstream 0.5kb upstream 2022 true Bd2: 58049478-58051499 Brachypodium distachyon
Bradi2g61090 0.5kb upstream 0.5kb upstream 500 false Bd2: 58049478-58049977 Brachypodium distachyon
Bradi2g61090 0.5kb downstream 0.5kb downstream 2022 true Bd2: 58049978-58051999 Brachypodium distachyon
Bradi2g61090 0.5kb downstream 0.5kb downstream 500 false Bd2: 58051500-58051999 Brachypodium distachyon
Bradi2g61090 1.0kb upstream 1.0kb upstream 2522 true Bd2: 58048978-58051499 Brachypodium distachyon
Bradi2g61090 1.0kb upstream 1.0kb upstream 1000 false Bd2: 58048978-58049977 Brachypodium distachyon
Bradi2g61090 1.0kb downstream 1.0kb downstream 2522 true Bd2: 58049978-58052499 Brachypodium distachyon
Bradi2g61090 1.0kb downstream 1.0kb downstream 1000 false Bd2: 58051500-58052499 Brachypodium distachyon
Bradi2g61090 2.0kb upstream 2.0kb upstream 3522 true Bd2: 58047978-58051499 Brachypodium distachyon
Bradi2g61090 2.0kb upstream 2.0kb upstream 2000 false Bd2: 58047978-58049977 Brachypodium distachyon
Bradi2g61090 2.0kb downstream 2.0kb downstream 3522 true Bd2: 58049978-58053499 Brachypodium distachyon
Bradi2g61090 2.0kb downstream 2.0kb downstream 2000 false Bd2: 58051500-58053499 Brachypodium distachyon
Bradi2g61090 5.0kb upstream 5.0kb upstream 6522 true Bd2: 58044978-58051499 Brachypodium distachyon
Bradi2g61090 5.0kb upstream 5.0kb upstream 5000 false Bd2: 58044978-58049977 Brachypodium distachyon
Bradi2g61090 5.0kb downstream 5.0kb downstream 6522 true Bd2: 58049978-58056499 Brachypodium distachyon
Bradi2g61090 5.0kb downstream 5.0kb downstream 5000 false Bd2: 58051500-58056499 Brachypodium distachyon
Bradi2g61090 10.0kb upstream 10.0kb upstream 11522 true Bd2: 58039978-58051499 Brachypodium distachyon
Bradi2g61090 10.0kb upstream 10.0kb upstream 10000 false Bd2: 58039978-58049977 Brachypodium distachyon
Bradi2g61090 10.0kb downstream 10.0kb downstream 11522 true Bd2: 58049978-58061499 Brachypodium distachyon
Bradi2g61090 10.0kb downstream 10.0kb downstream 10000 false Bd2: 58051500-58061499 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569457 5269 Grass View MSA
122042221 5273 Angiosperm View MSA
121309937 5274 Embryophyte View MSA
123347565 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.819     High  
cufflinks 1.607       Low
cufflinks 1.591       Low
cufflinks 1.902        
cufflinks 79.584     High High
cufflinks 2.84        
cufflinks 2.947        
cufflinks 4.109        
cufflinks 3.71        
cufflinks 6.979        
cufflinks 11.055     High  
cufflinks 3.138        
cufflinks 6.021        
cufflinks 7.669     High  
cufflinks 9.941     High  
cufflinks 2.1        
cufflinks 7.206        
cufflinks 0.729       Low
cufflinks 17.406     High High
cufflinks 92.995     High High
cufflinks 3.042        
cufflinks 3.453        
cufflinks 5.279        
cufflinks 3.895        
cufflinks 4.635        
cufflinks 2.686        
cufflinks 10.057     High  
cufflinks 3.452        
cufflinks 3.318        
cufflinks 4.041        

0 Strain