Gene : Bradi2g61140 B. distachyon v3.1
Defline:  (1 of 2) 3.1.4.3 - Phospholipase C / Lipophosphodiesterase I Genomic Order:  7414
Name:  ? Bradi2g61140 Secondary Identifier:  ? PAC:32780280
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon LIPASYN-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g61140 0.5kb upstream 0.5kb upstream 4770 true Bd2: 58077938-58082707 Brachypodium distachyon
Bradi2g61140 0.5kb upstream 0.5kb upstream 500 false Bd2: 58082208-58082707 Brachypodium distachyon
Bradi2g61140 0.5kb downstream 0.5kb downstream 4770 true Bd2: 58077438-58082207 Brachypodium distachyon
Bradi2g61140 0.5kb downstream 0.5kb downstream 500 false Bd2: 58077438-58077937 Brachypodium distachyon
Bradi2g61140 1.0kb upstream 1.0kb upstream 5270 true Bd2: 58077938-58083207 Brachypodium distachyon
Bradi2g61140 1.0kb upstream 1.0kb upstream 1000 false Bd2: 58082208-58083207 Brachypodium distachyon
Bradi2g61140 1.0kb downstream 1.0kb downstream 5270 true Bd2: 58076938-58082207 Brachypodium distachyon
Bradi2g61140 1.0kb downstream 1.0kb downstream 1000 false Bd2: 58076938-58077937 Brachypodium distachyon
Bradi2g61140 2.0kb upstream 2.0kb upstream 6270 true Bd2: 58077938-58084207 Brachypodium distachyon
Bradi2g61140 2.0kb upstream 2.0kb upstream 2000 false Bd2: 58082208-58084207 Brachypodium distachyon
Bradi2g61140 2.0kb downstream 2.0kb downstream 6270 true Bd2: 58075938-58082207 Brachypodium distachyon
Bradi2g61140 2.0kb downstream 2.0kb downstream 2000 false Bd2: 58075938-58077937 Brachypodium distachyon
Bradi2g61140 5.0kb upstream 5.0kb upstream 9270 true Bd2: 58077938-58087207 Brachypodium distachyon
Bradi2g61140 5.0kb upstream 5.0kb upstream 5000 false Bd2: 58082208-58087207 Brachypodium distachyon
Bradi2g61140 5.0kb downstream 5.0kb downstream 9270 true Bd2: 58072938-58082207 Brachypodium distachyon
Bradi2g61140 5.0kb downstream 5.0kb downstream 5000 false Bd2: 58072938-58077937 Brachypodium distachyon
Bradi2g61140 10.0kb upstream 10.0kb upstream 14270 true Bd2: 58077938-58092207 Brachypodium distachyon
Bradi2g61140 10.0kb upstream 10.0kb upstream 10000 false Bd2: 58082208-58092207 Brachypodium distachyon
Bradi2g61140 10.0kb downstream 10.0kb downstream 14270 true Bd2: 58067938-58082207 Brachypodium distachyon
Bradi2g61140 10.0kb downstream 10.0kb downstream 10000 false Bd2: 58067938-58077937 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568850 5269 Grass View MSA
122048233 5273 Angiosperm View MSA
121345811 5274 Embryophyte View MSA
123380272 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.594        
cufflinks 0.913        
cufflinks 0.922        
cufflinks 0.784        
cufflinks 0.847        
cufflinks 0.476        
cufflinks 0.879        
cufflinks 0.369        
cufflinks 0.39        
cufflinks 0.468        
cufflinks 0.063     Low Low
cufflinks 0.4        
cufflinks 0.099       Low
cufflinks 0.02     Low Low
cufflinks 0.317        
cufflinks 0.7        
cufflinks 0.595        
cufflinks 1.813       High
cufflinks 0.828        
cufflinks 0.12     Low Low
cufflinks 1.654       High
cufflinks 0.63        
cufflinks 0.682        
cufflinks 0.436        
cufflinks 0.46        
cufflinks 0.785        
cufflinks 0.029     Low Low
cufflinks 0.676        
cufflinks 0.568        
cufflinks 1.995       High

0 Strain