Gene : Bradi2g61300 B. distachyon v3.1
Defline:  (1 of 1) PTHR21576:SF19 - ARM REPEAT SUPERFAMILY PROTEIN Genomic Order:  7439
Name:  ? Bradi2g61300 Secondary Identifier:  ? PAC:32777821
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g61300 0.5kb upstream 0.5kb upstream 10969 true Bd2: 58240191-58251159 Brachypodium distachyon
Bradi2g61300 0.5kb upstream 0.5kb upstream 500 false Bd2: 58240191-58240690 Brachypodium distachyon
Bradi2g61300 0.5kb downstream 0.5kb downstream 10969 true Bd2: 58240691-58251659 Brachypodium distachyon
Bradi2g61300 0.5kb downstream 0.5kb downstream 500 false Bd2: 58251160-58251659 Brachypodium distachyon
Bradi2g61300 1.0kb upstream 1.0kb upstream 11469 true Bd2: 58239691-58251159 Brachypodium distachyon
Bradi2g61300 1.0kb upstream 1.0kb upstream 1000 false Bd2: 58239691-58240690 Brachypodium distachyon
Bradi2g61300 1.0kb downstream 1.0kb downstream 11469 true Bd2: 58240691-58252159 Brachypodium distachyon
Bradi2g61300 1.0kb downstream 1.0kb downstream 1000 false Bd2: 58251160-58252159 Brachypodium distachyon
Bradi2g61300 2.0kb upstream 2.0kb upstream 12469 true Bd2: 58238691-58251159 Brachypodium distachyon
Bradi2g61300 2.0kb upstream 2.0kb upstream 2000 false Bd2: 58238691-58240690 Brachypodium distachyon
Bradi2g61300 2.0kb downstream 2.0kb downstream 12469 true Bd2: 58240691-58253159 Brachypodium distachyon
Bradi2g61300 2.0kb downstream 2.0kb downstream 2000 false Bd2: 58251160-58253159 Brachypodium distachyon
Bradi2g61300 5.0kb upstream 5.0kb upstream 15469 true Bd2: 58235691-58251159 Brachypodium distachyon
Bradi2g61300 5.0kb upstream 5.0kb upstream 5000 false Bd2: 58235691-58240690 Brachypodium distachyon
Bradi2g61300 5.0kb downstream 5.0kb downstream 15469 true Bd2: 58240691-58256159 Brachypodium distachyon
Bradi2g61300 5.0kb downstream 5.0kb downstream 5000 false Bd2: 58251160-58256159 Brachypodium distachyon
Bradi2g61300 10.0kb upstream 10.0kb upstream 20469 true Bd2: 58230691-58251159 Brachypodium distachyon
Bradi2g61300 10.0kb upstream 10.0kb upstream 10000 false Bd2: 58230691-58240690 Brachypodium distachyon
Bradi2g61300 10.0kb downstream 10.0kb downstream 20469 true Bd2: 58240691-58261159 Brachypodium distachyon
Bradi2g61300 10.0kb downstream 10.0kb downstream 10000 false Bd2: 58251160-58261159 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584462 5269 Grass View MSA
122044020 5273 Angiosperm View MSA
121310227 5274 Embryophyte View MSA
123347775 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.085        
cufflinks 3.998        
cufflinks 2.677        
cufflinks 2.203        
cufflinks 0.364       Low
cufflinks 3.001        
cufflinks 3.206        
cufflinks 1.756        
cufflinks 2.325        
cufflinks 0.84        
cufflinks 1.328        
cufflinks 2.241        
cufflinks 0.64        
cufflinks 0.739        
cufflinks 0.533        
cufflinks 3.496        
cufflinks 1.503        
cufflinks 6.187       High
cufflinks 2.003        
cufflinks 0.01     Low Low
cufflinks 1.534        
cufflinks 1.938        
cufflinks 1.531        
cufflinks 1.664        
cufflinks 2.392        
cufflinks 1.7        
cufflinks 0.928        
cufflinks 1.469        
cufflinks 1.45        
cufflinks 2.803        

0 Strain