Gene : Bradi4g27040 B. distachyon v3.1
Defline:  (1 of 2) PTHR12231:SF111 - MATRIX-REMODELING-ASSOCIATED PROTEIN 8 Genomic Order:  3446
Name:  ? Bradi4g27040 Secondary Identifier:  ? PAC:32787789
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g27040 0.5kb upstream 0.5kb upstream 3333 true Bd4: 31942733-31946065 Brachypodium distachyon
Bradi4g27040 0.5kb upstream 0.5kb upstream 500 false Bd4: 31942733-31943232 Brachypodium distachyon
Bradi4g27040 0.5kb downstream 0.5kb downstream 3333 true Bd4: 31943233-31946565 Brachypodium distachyon
Bradi4g27040 0.5kb downstream 0.5kb downstream 500 false Bd4: 31946066-31946565 Brachypodium distachyon
Bradi4g27040 1.0kb upstream 1.0kb upstream 3833 true Bd4: 31942233-31946065 Brachypodium distachyon
Bradi4g27040 1.0kb upstream 1.0kb upstream 1000 false Bd4: 31942233-31943232 Brachypodium distachyon
Bradi4g27040 1.0kb downstream 1.0kb downstream 3833 true Bd4: 31943233-31947065 Brachypodium distachyon
Bradi4g27040 1.0kb downstream 1.0kb downstream 1000 false Bd4: 31946066-31947065 Brachypodium distachyon
Bradi4g27040 2.0kb upstream 2.0kb upstream 4833 true Bd4: 31941233-31946065 Brachypodium distachyon
Bradi4g27040 2.0kb upstream 2.0kb upstream 2000 false Bd4: 31941233-31943232 Brachypodium distachyon
Bradi4g27040 2.0kb downstream 2.0kb downstream 4833 true Bd4: 31943233-31948065 Brachypodium distachyon
Bradi4g27040 2.0kb downstream 2.0kb downstream 2000 false Bd4: 31946066-31948065 Brachypodium distachyon
Bradi4g27040 5.0kb upstream 5.0kb upstream 7833 true Bd4: 31938233-31946065 Brachypodium distachyon
Bradi4g27040 5.0kb upstream 5.0kb upstream 5000 false Bd4: 31938233-31943232 Brachypodium distachyon
Bradi4g27040 5.0kb downstream 5.0kb downstream 7833 true Bd4: 31943233-31951065 Brachypodium distachyon
Bradi4g27040 5.0kb downstream 5.0kb downstream 5000 false Bd4: 31946066-31951065 Brachypodium distachyon
Bradi4g27040 10.0kb upstream 10.0kb upstream 12833 true Bd4: 31933233-31946065 Brachypodium distachyon
Bradi4g27040 10.0kb upstream 10.0kb upstream 10000 false Bd4: 31933233-31943232 Brachypodium distachyon
Bradi4g27040 10.0kb downstream 10.0kb downstream 12833 true Bd4: 31943233-31956065 Brachypodium distachyon
Bradi4g27040 10.0kb downstream 10.0kb downstream 10000 false Bd4: 31946066-31956065 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574956 5269 Grass View MSA
122046652 5273 Angiosperm View MSA
121347654 5274 Embryophyte View MSA
123380591 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 62.415     High  
cufflinks 70.345     High  
cufflinks 37.147     High  
cufflinks 67.062     High  
cufflinks 45.645     High  
cufflinks 84.766     High  
cufflinks 82.598     High  
cufflinks 64.285     High  
cufflinks 78.096     High  
cufflinks 70.603     High  
cufflinks 55.764     High  
cufflinks 63.612     High  
cufflinks 87.997     High  
cufflinks 82.332     High  
cufflinks 63.072     High  
cufflinks 81.574     High  
cufflinks 91.139     High  
cufflinks 2.706       Low
cufflinks 31.463     High  
cufflinks 6.766       Low
cufflinks 43.824     High  
cufflinks 47.894     High  
cufflinks 56.215     High  
cufflinks 80.947     High  
cufflinks 91.207     High  
cufflinks 45.293     High  
cufflinks 69.299     High  
cufflinks 47.621     High  
cufflinks 49.783     High  
cufflinks 43.282     High  

0 Strain