Gene : Bradi2g61410 B. distachyon v3.1
Defline:  (1 of 1) PF11910 - Cyanobacterial and plant NDH-1 subunit O (NdhO) Genomic Order:  7452
Name:  ? Bradi2g61410 Secondary Identifier:  ? PAC:32772359
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g61410 0.5kb upstream 0.5kb upstream 2343 true Bd2: 58312057-58314399 Brachypodium distachyon
Bradi2g61410 0.5kb upstream 0.5kb upstream 500 false Bd2: 58312057-58312556 Brachypodium distachyon
Bradi2g61410 0.5kb downstream 0.5kb downstream 2343 true Bd2: 58312557-58314899 Brachypodium distachyon
Bradi2g61410 0.5kb downstream 0.5kb downstream 500 false Bd2: 58314400-58314899 Brachypodium distachyon
Bradi2g61410 1.0kb upstream 1.0kb upstream 2843 true Bd2: 58311557-58314399 Brachypodium distachyon
Bradi2g61410 1.0kb upstream 1.0kb upstream 1000 false Bd2: 58311557-58312556 Brachypodium distachyon
Bradi2g61410 1.0kb downstream 1.0kb downstream 2843 true Bd2: 58312557-58315399 Brachypodium distachyon
Bradi2g61410 1.0kb downstream 1.0kb downstream 1000 false Bd2: 58314400-58315399 Brachypodium distachyon
Bradi2g61410 2.0kb upstream 2.0kb upstream 3843 true Bd2: 58310557-58314399 Brachypodium distachyon
Bradi2g61410 2.0kb upstream 2.0kb upstream 2000 false Bd2: 58310557-58312556 Brachypodium distachyon
Bradi2g61410 2.0kb downstream 2.0kb downstream 3843 true Bd2: 58312557-58316399 Brachypodium distachyon
Bradi2g61410 2.0kb downstream 2.0kb downstream 2000 false Bd2: 58314400-58316399 Brachypodium distachyon
Bradi2g61410 5.0kb upstream 5.0kb upstream 6843 true Bd2: 58307557-58314399 Brachypodium distachyon
Bradi2g61410 5.0kb upstream 5.0kb upstream 5000 false Bd2: 58307557-58312556 Brachypodium distachyon
Bradi2g61410 5.0kb downstream 5.0kb downstream 6843 true Bd2: 58312557-58319399 Brachypodium distachyon
Bradi2g61410 5.0kb downstream 5.0kb downstream 5000 false Bd2: 58314400-58319399 Brachypodium distachyon
Bradi2g61410 10.0kb upstream 10.0kb upstream 11843 true Bd2: 58302557-58314399 Brachypodium distachyon
Bradi2g61410 10.0kb upstream 10.0kb upstream 10000 false Bd2: 58302557-58312556 Brachypodium distachyon
Bradi2g61410 10.0kb downstream 10.0kb downstream 11843 true Bd2: 58312557-58324399 Brachypodium distachyon
Bradi2g61410 10.0kb downstream 10.0kb downstream 10000 false Bd2: 58314400-58324399 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568380 5269 Grass View MSA
122043742 5273 Angiosperm View MSA
121347549 5274 Embryophyte View MSA
123380569 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 69.17     High  
cufflinks 41.821     High  
cufflinks 48.878     High  
cufflinks 68.876     High  
cufflinks 67.479     High  
cufflinks 41.031     High  
cufflinks 43.853     High  
cufflinks 47.55     High  
cufflinks 44.701     High  
cufflinks 130.915     High High
cufflinks 64.792     High  
cufflinks 32.303     High  
cufflinks 59.654     High  
cufflinks 76.679     High  
cufflinks 59.191     High  
cufflinks 40.911     High  
cufflinks 83.859     High  
cufflinks 1.203       Low
cufflinks 55.877     High  
cufflinks 75.725     High  
cufflinks 48.291     High  
cufflinks 55.793     High  
cufflinks 57.105     High  
cufflinks 54.878     High  
cufflinks 64.611     High  
cufflinks 76.279     High  
cufflinks 68.232     High  
cufflinks 90.09     High  
cufflinks 79.613     High  
cufflinks 18.921     High  

0 Strain