Gene : Bradi2g61640 B. distachyon v3.1
Defline:  (1 of 6) PF01823 - MAC/Perforin domain (MACPF) Genomic Order:  7485
Name:  ? Bradi2g61640 Secondary Identifier:  ? PAC:32777685
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g61640 0.5kb upstream 0.5kb upstream 6677 true Bd2: 58447638-58454314 Brachypodium distachyon
Bradi2g61640 0.5kb upstream 0.5kb upstream 500 false Bd2: 58447638-58448137 Brachypodium distachyon
Bradi2g61640 0.5kb downstream 0.5kb downstream 6677 true Bd2: 58448138-58454814 Brachypodium distachyon
Bradi2g61640 0.5kb downstream 0.5kb downstream 500 false Bd2: 58454315-58454814 Brachypodium distachyon
Bradi2g61640 1.0kb upstream 1.0kb upstream 7177 true Bd2: 58447138-58454314 Brachypodium distachyon
Bradi2g61640 1.0kb upstream 1.0kb upstream 1000 false Bd2: 58447138-58448137 Brachypodium distachyon
Bradi2g61640 1.0kb downstream 1.0kb downstream 7177 true Bd2: 58448138-58455314 Brachypodium distachyon
Bradi2g61640 1.0kb downstream 1.0kb downstream 1000 false Bd2: 58454315-58455314 Brachypodium distachyon
Bradi2g61640 2.0kb upstream 2.0kb upstream 8177 true Bd2: 58446138-58454314 Brachypodium distachyon
Bradi2g61640 2.0kb upstream 2.0kb upstream 2000 false Bd2: 58446138-58448137 Brachypodium distachyon
Bradi2g61640 2.0kb downstream 2.0kb downstream 8177 true Bd2: 58448138-58456314 Brachypodium distachyon
Bradi2g61640 2.0kb downstream 2.0kb downstream 2000 false Bd2: 58454315-58456314 Brachypodium distachyon
Bradi2g61640 5.0kb upstream 5.0kb upstream 11177 true Bd2: 58443138-58454314 Brachypodium distachyon
Bradi2g61640 5.0kb upstream 5.0kb upstream 5000 false Bd2: 58443138-58448137 Brachypodium distachyon
Bradi2g61640 5.0kb downstream 5.0kb downstream 11177 true Bd2: 58448138-58459314 Brachypodium distachyon
Bradi2g61640 5.0kb downstream 5.0kb downstream 5000 false Bd2: 58454315-58459314 Brachypodium distachyon
Bradi2g61640 10.0kb upstream 10.0kb upstream 16177 true Bd2: 58438138-58454314 Brachypodium distachyon
Bradi2g61640 10.0kb upstream 10.0kb upstream 10000 false Bd2: 58438138-58448137 Brachypodium distachyon
Bradi2g61640 10.0kb downstream 10.0kb downstream 16177 true Bd2: 58448138-58464314 Brachypodium distachyon
Bradi2g61640 10.0kb downstream 10.0kb downstream 10000 false Bd2: 58454315-58464314 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588584 5269 Grass View MSA
122047802 5273 Angiosperm View MSA
121349025 5274 Embryophyte View MSA
123381129 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.565        
cufflinks 6.221        
cufflinks 6.729        
cufflinks 5.208        
cufflinks 4.887        
cufflinks 5.806        
cufflinks 5.433        
cufflinks 5.209        
cufflinks 5.344        
cufflinks 4.105       Low
cufflinks 7.319        
cufflinks 6.522        
cufflinks 6.375        
cufflinks 5.439        
cufflinks 6.849        
cufflinks 5.715        
cufflinks 4.413        
cufflinks 8.223       High
cufflinks 5.776        
cufflinks 7.099        
cufflinks 6.07        
cufflinks 6.165        
cufflinks 5.355        
cufflinks 5.158        
cufflinks 4.647        
cufflinks 5.773        
cufflinks 6.992        
cufflinks 5.937        
cufflinks 5.384        
cufflinks 6.514        

0 Strain