Gene : Bradi2g61540 B. distachyon v3.1
Defline:  (1 of 1) KOG3483 - Uncharacterized conserved protein Genomic Order:  7473
Name:  ? Bradi2g61540 Secondary Identifier:  ? PAC:32781752
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g61540 0.5kb upstream 0.5kb upstream 2372 true Bd2: 58400873-58403244 Brachypodium distachyon
Bradi2g61540 0.5kb upstream 0.5kb upstream 500 false Bd2: 58402745-58403244 Brachypodium distachyon
Bradi2g61540 0.5kb downstream 0.5kb downstream 2372 true Bd2: 58400373-58402744 Brachypodium distachyon
Bradi2g61540 0.5kb downstream 0.5kb downstream 500 false Bd2: 58400373-58400872 Brachypodium distachyon
Bradi2g61540 1.0kb upstream 1.0kb upstream 2872 true Bd2: 58400873-58403744 Brachypodium distachyon
Bradi2g61540 1.0kb upstream 1.0kb upstream 1000 false Bd2: 58402745-58403744 Brachypodium distachyon
Bradi2g61540 1.0kb downstream 1.0kb downstream 2872 true Bd2: 58399873-58402744 Brachypodium distachyon
Bradi2g61540 1.0kb downstream 1.0kb downstream 1000 false Bd2: 58399873-58400872 Brachypodium distachyon
Bradi2g61540 2.0kb upstream 2.0kb upstream 3872 true Bd2: 58400873-58404744 Brachypodium distachyon
Bradi2g61540 2.0kb upstream 2.0kb upstream 2000 false Bd2: 58402745-58404744 Brachypodium distachyon
Bradi2g61540 2.0kb downstream 2.0kb downstream 3872 true Bd2: 58398873-58402744 Brachypodium distachyon
Bradi2g61540 2.0kb downstream 2.0kb downstream 2000 false Bd2: 58398873-58400872 Brachypodium distachyon
Bradi2g61540 5.0kb upstream 5.0kb upstream 6872 true Bd2: 58400873-58407744 Brachypodium distachyon
Bradi2g61540 5.0kb upstream 5.0kb upstream 5000 false Bd2: 58402745-58407744 Brachypodium distachyon
Bradi2g61540 5.0kb downstream 5.0kb downstream 6872 true Bd2: 58395873-58402744 Brachypodium distachyon
Bradi2g61540 5.0kb downstream 5.0kb downstream 5000 false Bd2: 58395873-58400872 Brachypodium distachyon
Bradi2g61540 10.0kb upstream 10.0kb upstream 11872 true Bd2: 58400873-58412744 Brachypodium distachyon
Bradi2g61540 10.0kb upstream 10.0kb upstream 10000 false Bd2: 58402745-58412744 Brachypodium distachyon
Bradi2g61540 10.0kb downstream 10.0kb downstream 11872 true Bd2: 58390873-58402744 Brachypodium distachyon
Bradi2g61540 10.0kb downstream 10.0kb downstream 10000 false Bd2: 58390873-58400872 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576989 5269 Grass View MSA
122045527 5273 Angiosperm View MSA
121349624 5274 Embryophyte View MSA
123424259 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.526        
cufflinks 6.471       Low
cufflinks 7.61        
cufflinks 10.463     High  
cufflinks 12.991     High  
cufflinks 6.24       Low
cufflinks 7.889        
cufflinks 6.29       Low
cufflinks 6.834        
cufflinks 10.957     High  
cufflinks 7.878        
cufflinks 6.39       Low
cufflinks 6.06       Low
cufflinks 9.516     High  
cufflinks 10.511     High  
cufflinks 4.951       Low
cufflinks 10.592        
cufflinks 8.88        
cufflinks 10.804        
cufflinks 20.478     High High
cufflinks 30.958     High High
cufflinks 5.518       Low
cufflinks 6.641       Low
cufflinks 7.233        
cufflinks 9.35        
cufflinks 9.223        
cufflinks 10.459     High  
cufflinks 10.988     High  
cufflinks 8.877        
cufflinks 11.91     High  

0 Strain