Gene : Bradi4g26920 B. distachyon v3.1
Defline:  (1 of 3) PTHR22761:SF8 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 32 HOMOLOG 1-RELATED Genomic Order:  3432
Name:  ? Bradi4g26920 Secondary Identifier:  ? PAC:32785556
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g26920 0.5kb upstream 0.5kb upstream 6959 true Bd4: 31814226-31821184 Brachypodium distachyon
Bradi4g26920 0.5kb upstream 0.5kb upstream 500 false Bd4: 31814226-31814725 Brachypodium distachyon
Bradi4g26920 0.5kb downstream 0.5kb downstream 6959 true Bd4: 31814726-31821684 Brachypodium distachyon
Bradi4g26920 0.5kb downstream 0.5kb downstream 500 false Bd4: 31821185-31821684 Brachypodium distachyon
Bradi4g26920 1.0kb upstream 1.0kb upstream 7459 true Bd4: 31813726-31821184 Brachypodium distachyon
Bradi4g26920 1.0kb upstream 1.0kb upstream 1000 false Bd4: 31813726-31814725 Brachypodium distachyon
Bradi4g26920 1.0kb downstream 1.0kb downstream 7459 true Bd4: 31814726-31822184 Brachypodium distachyon
Bradi4g26920 1.0kb downstream 1.0kb downstream 1000 false Bd4: 31821185-31822184 Brachypodium distachyon
Bradi4g26920 2.0kb upstream 2.0kb upstream 8459 true Bd4: 31812726-31821184 Brachypodium distachyon
Bradi4g26920 2.0kb upstream 2.0kb upstream 2000 false Bd4: 31812726-31814725 Brachypodium distachyon
Bradi4g26920 2.0kb downstream 2.0kb downstream 8459 true Bd4: 31814726-31823184 Brachypodium distachyon
Bradi4g26920 2.0kb downstream 2.0kb downstream 2000 false Bd4: 31821185-31823184 Brachypodium distachyon
Bradi4g26920 5.0kb upstream 5.0kb upstream 11459 true Bd4: 31809726-31821184 Brachypodium distachyon
Bradi4g26920 5.0kb upstream 5.0kb upstream 5000 false Bd4: 31809726-31814725 Brachypodium distachyon
Bradi4g26920 5.0kb downstream 5.0kb downstream 11459 true Bd4: 31814726-31826184 Brachypodium distachyon
Bradi4g26920 5.0kb downstream 5.0kb downstream 5000 false Bd4: 31821185-31826184 Brachypodium distachyon
Bradi4g26920 10.0kb upstream 10.0kb upstream 16459 true Bd4: 31804726-31821184 Brachypodium distachyon
Bradi4g26920 10.0kb upstream 10.0kb upstream 10000 false Bd4: 31804726-31814725 Brachypodium distachyon
Bradi4g26920 10.0kb downstream 10.0kb downstream 16459 true Bd4: 31814726-31831184 Brachypodium distachyon
Bradi4g26920 10.0kb downstream 10.0kb downstream 10000 false Bd4: 31821185-31831184 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589159 5269 Grass View MSA
122048548 5273 Angiosperm View MSA
121350329 5274 Embryophyte View MSA
123426511 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.086        
cufflinks 3.584        
cufflinks 4.297        
cufflinks 3.853        
cufflinks 3.104        
cufflinks 3.252        
cufflinks 3.538        
cufflinks 3.383        
cufflinks 3.036        
cufflinks 4.166        
cufflinks 3.263        
cufflinks 3.011        
cufflinks 2.928        
cufflinks 3.111        
cufflinks 3.67        
cufflinks 3.263        
cufflinks 3.899        
cufflinks 3.08        
cufflinks 3.573        
cufflinks 1.514       Low
cufflinks 5.132       High
cufflinks 3.904        
cufflinks 3.153        
cufflinks 3.267        
cufflinks 3.272        
cufflinks 4.711       High
cufflinks 3.304        
cufflinks 4.726       High
cufflinks 4.172        
cufflinks 3.887        

0 Strain