Gene : Bradi4g27070 B. distachyon v3.1
Defline:  (1 of 1) 1.1.1.179//1.1.1.371//1.3.1.20 - D-xylose 1-dehydrogenase (NADP(+)) / D-xylose-NADP dehydrogenase // Scyllo-inositol 2-dehydrogenase (NADP(+)) // Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase Genomic Order:  3449
Name:  ? Bradi4g27070 Secondary Identifier:  ? PAC:32789034
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g27070 0.5kb upstream 0.5kb upstream 5039 true Bd4: 31976465-31981503 Brachypodium distachyon
Bradi4g27070 0.5kb upstream 0.5kb upstream 500 false Bd4: 31976465-31976964 Brachypodium distachyon
Bradi4g27070 0.5kb downstream 0.5kb downstream 5039 true Bd4: 31976965-31982003 Brachypodium distachyon
Bradi4g27070 0.5kb downstream 0.5kb downstream 500 false Bd4: 31981504-31982003 Brachypodium distachyon
Bradi4g27070 1.0kb upstream 1.0kb upstream 5539 true Bd4: 31975965-31981503 Brachypodium distachyon
Bradi4g27070 1.0kb upstream 1.0kb upstream 1000 false Bd4: 31975965-31976964 Brachypodium distachyon
Bradi4g27070 1.0kb downstream 1.0kb downstream 5539 true Bd4: 31976965-31982503 Brachypodium distachyon
Bradi4g27070 1.0kb downstream 1.0kb downstream 1000 false Bd4: 31981504-31982503 Brachypodium distachyon
Bradi4g27070 2.0kb upstream 2.0kb upstream 6539 true Bd4: 31974965-31981503 Brachypodium distachyon
Bradi4g27070 2.0kb upstream 2.0kb upstream 2000 false Bd4: 31974965-31976964 Brachypodium distachyon
Bradi4g27070 2.0kb downstream 2.0kb downstream 6539 true Bd4: 31976965-31983503 Brachypodium distachyon
Bradi4g27070 2.0kb downstream 2.0kb downstream 2000 false Bd4: 31981504-31983503 Brachypodium distachyon
Bradi4g27070 5.0kb upstream 5.0kb upstream 9539 true Bd4: 31971965-31981503 Brachypodium distachyon
Bradi4g27070 5.0kb upstream 5.0kb upstream 5000 false Bd4: 31971965-31976964 Brachypodium distachyon
Bradi4g27070 5.0kb downstream 5.0kb downstream 9539 true Bd4: 31976965-31986503 Brachypodium distachyon
Bradi4g27070 5.0kb downstream 5.0kb downstream 5000 false Bd4: 31981504-31986503 Brachypodium distachyon
Bradi4g27070 10.0kb upstream 10.0kb upstream 14539 true Bd4: 31966965-31981503 Brachypodium distachyon
Bradi4g27070 10.0kb upstream 10.0kb upstream 10000 false Bd4: 31966965-31976964 Brachypodium distachyon
Bradi4g27070 10.0kb downstream 10.0kb downstream 14539 true Bd4: 31976965-31991503 Brachypodium distachyon
Bradi4g27070 10.0kb downstream 10.0kb downstream 10000 false Bd4: 31981504-31991503 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577667 5269 Grass View MSA
122041944 5273 Angiosperm View MSA
121346976 5274 Embryophyte View MSA
123425527 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.103        
cufflinks 3.735        
cufflinks 3.287        
cufflinks 3.58        
cufflinks 2.05        
cufflinks 3.043        
cufflinks 3.197        
cufflinks 2.216        
cufflinks 2.51        
cufflinks 2.331        
cufflinks 0.585       Low
cufflinks 2.446        
cufflinks 0.515       Low
cufflinks 0.42       Low
cufflinks 1.085        
cufflinks 2.756        
cufflinks 3.744        
cufflinks 4.331       High
cufflinks 4.033        
cufflinks 0.597       Low
cufflinks 4.724       High
cufflinks 2.988        
cufflinks 2.285        
cufflinks 2.421        
cufflinks 3.022        
cufflinks 3.533        
cufflinks 0.46       Low
cufflinks 2.98        
cufflinks 2.84        
cufflinks 4.561       High

0 Strain