Gene : Bradi2g61850 B. distachyon v3.1
Defline:  (1 of 1) K01597 - diphosphomevalonate decarboxylase (MVD, mvaD) Genomic Order:  7512
Name:  ? Bradi2g61850 Secondary Identifier:  ? PAC:32773681
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5910 Brachypodium distachyon pathologic  
Bdistachyon PWY-922 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g61850 0.5kb upstream 0.5kb upstream 4676 true Bd2: 58573114-58577789 Brachypodium distachyon
Bradi2g61850 0.5kb upstream 0.5kb upstream 500 false Bd2: 58573114-58573613 Brachypodium distachyon
Bradi2g61850 0.5kb downstream 0.5kb downstream 4676 true Bd2: 58573614-58578289 Brachypodium distachyon
Bradi2g61850 0.5kb downstream 0.5kb downstream 500 false Bd2: 58577790-58578289 Brachypodium distachyon
Bradi2g61850 1.0kb upstream 1.0kb upstream 5176 true Bd2: 58572614-58577789 Brachypodium distachyon
Bradi2g61850 1.0kb upstream 1.0kb upstream 1000 false Bd2: 58572614-58573613 Brachypodium distachyon
Bradi2g61850 1.0kb downstream 1.0kb downstream 5176 true Bd2: 58573614-58578789 Brachypodium distachyon
Bradi2g61850 1.0kb downstream 1.0kb downstream 1000 false Bd2: 58577790-58578789 Brachypodium distachyon
Bradi2g61850 2.0kb upstream 2.0kb upstream 6176 true Bd2: 58571614-58577789 Brachypodium distachyon
Bradi2g61850 2.0kb upstream 2.0kb upstream 2000 false Bd2: 58571614-58573613 Brachypodium distachyon
Bradi2g61850 2.0kb downstream 2.0kb downstream 6176 true Bd2: 58573614-58579789 Brachypodium distachyon
Bradi2g61850 2.0kb downstream 2.0kb downstream 2000 false Bd2: 58577790-58579789 Brachypodium distachyon
Bradi2g61850 5.0kb upstream 5.0kb upstream 9176 true Bd2: 58568614-58577789 Brachypodium distachyon
Bradi2g61850 5.0kb upstream 5.0kb upstream 5000 false Bd2: 58568614-58573613 Brachypodium distachyon
Bradi2g61850 5.0kb downstream 5.0kb downstream 9176 true Bd2: 58573614-58582789 Brachypodium distachyon
Bradi2g61850 5.0kb downstream 5.0kb downstream 5000 false Bd2: 58577790-58582789 Brachypodium distachyon
Bradi2g61850 10.0kb upstream 10.0kb upstream 14176 true Bd2: 58563614-58577789 Brachypodium distachyon
Bradi2g61850 10.0kb upstream 10.0kb upstream 10000 false Bd2: 58563614-58573613 Brachypodium distachyon
Bradi2g61850 10.0kb downstream 10.0kb downstream 14176 true Bd2: 58573614-58587789 Brachypodium distachyon
Bradi2g61850 10.0kb downstream 10.0kb downstream 10000 false Bd2: 58577790-58587789 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040965 5273 Angiosperm View MSA
124575988 5269 Grass View MSA
121347307 5274 Embryophyte View MSA
123380524 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.306        
cufflinks 8.343        
cufflinks 9.268        
cufflinks 6.647        
cufflinks 7.477        
cufflinks 9.021        
cufflinks 7.668        
cufflinks 10.205     High  
cufflinks 8.379        
cufflinks 9.449        
cufflinks 2.799       Low
cufflinks 11.393     High  
cufflinks 7.123        
cufflinks 4.171       Low
cufflinks 5.303        
cufflinks 10.325     High  
cufflinks 10.832        
cufflinks 22.865     High High
cufflinks 10.53        
cufflinks 2.718       Low
cufflinks 9.954        
cufflinks 14.307     High High
cufflinks 8.942        
cufflinks 7.846        
cufflinks 6.898        
cufflinks 9.112        
cufflinks 6.524        
cufflinks 8.424        
cufflinks 10.895     High  
cufflinks 13.643     High High

0 Strain