Gene : Bradi2g62257 B. distachyon v3.1
Defline:  (1 of 1) PTHR14281:SF0 - KINETOCHORE PROTEIN SPC25 Genomic Order:  7568
Name:  ? Bradi2g62257 Secondary Identifier:  ? PAC:32782154
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g62257 0.5kb upstream 0.5kb upstream 3787 true Bd2: 58774159-58777945 Brachypodium distachyon
Bradi2g62257 0.5kb upstream 0.5kb upstream 500 false Bd2: 58777446-58777945 Brachypodium distachyon
Bradi2g62257 0.5kb downstream 0.5kb downstream 3787 true Bd2: 58773659-58777445 Brachypodium distachyon
Bradi2g62257 0.5kb downstream 0.5kb downstream 500 false Bd2: 58773659-58774158 Brachypodium distachyon
Bradi2g62257 1.0kb upstream 1.0kb upstream 4287 true Bd2: 58774159-58778445 Brachypodium distachyon
Bradi2g62257 1.0kb upstream 1.0kb upstream 1000 false Bd2: 58777446-58778445 Brachypodium distachyon
Bradi2g62257 1.0kb downstream 1.0kb downstream 4287 true Bd2: 58773159-58777445 Brachypodium distachyon
Bradi2g62257 1.0kb downstream 1.0kb downstream 1000 false Bd2: 58773159-58774158 Brachypodium distachyon
Bradi2g62257 2.0kb upstream 2.0kb upstream 5287 true Bd2: 58774159-58779445 Brachypodium distachyon
Bradi2g62257 2.0kb upstream 2.0kb upstream 2000 false Bd2: 58777446-58779445 Brachypodium distachyon
Bradi2g62257 2.0kb downstream 2.0kb downstream 5287 true Bd2: 58772159-58777445 Brachypodium distachyon
Bradi2g62257 2.0kb downstream 2.0kb downstream 2000 false Bd2: 58772159-58774158 Brachypodium distachyon
Bradi2g62257 5.0kb upstream 5.0kb upstream 8287 true Bd2: 58774159-58782445 Brachypodium distachyon
Bradi2g62257 5.0kb upstream 5.0kb upstream 5000 false Bd2: 58777446-58782445 Brachypodium distachyon
Bradi2g62257 5.0kb downstream 5.0kb downstream 8287 true Bd2: 58769159-58777445 Brachypodium distachyon
Bradi2g62257 5.0kb downstream 5.0kb downstream 5000 false Bd2: 58769159-58774158 Brachypodium distachyon
Bradi2g62257 10.0kb upstream 10.0kb upstream 13287 true Bd2: 58774159-58787445 Brachypodium distachyon
Bradi2g62257 10.0kb upstream 10.0kb upstream 10000 false Bd2: 58777446-58787445 Brachypodium distachyon
Bradi2g62257 10.0kb downstream 10.0kb downstream 13287 true Bd2: 58764159-58777445 Brachypodium distachyon
Bradi2g62257 10.0kb downstream 10.0kb downstream 10000 false Bd2: 58764159-58774158 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577788 5269 Grass View MSA
122047601 5273 Angiosperm View MSA
121348266 5274 Embryophyte View MSA
123424992 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.257        
cufflinks 0.503        
cufflinks 0.548        
cufflinks 0.534        
cufflinks 0.393        
cufflinks 0.464        
cufflinks 0.517        
cufflinks 0.417        
cufflinks 0.383        
cufflinks 0.306        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.286        
cufflinks 0.002     Low Low
cufflinks 0.002     Low Low
cufflinks 0.07     Low  
cufflinks 0.429        
cufflinks 0.431        
cufflinks 0.897        
cufflinks 0.649        
cufflinks 0.138     Low  
cufflinks 0.245        
cufflinks 0.548        
cufflinks 0.35        
cufflinks 0.247        
cufflinks 0.43        
cufflinks 0.595        
cufflinks 0.004     Low Low
cufflinks 0.447        
cufflinks 0.45        
cufflinks 0.503        

0 Strain