Gene : Bradi4g27310 B. distachyon v3.1
Defline:  (1 of 1) PTHR14499:SF11 - PROTEIN VM106R.1 Genomic Order:  3476
Name:  ? Bradi4g27310 Secondary Identifier:  ? PAC:32786551
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g27310 0.5kb upstream 0.5kb upstream 11010 true Bd4: 32323763-32334772 Brachypodium distachyon
Bradi4g27310 0.5kb upstream 0.5kb upstream 500 false Bd4: 32334273-32334772 Brachypodium distachyon
Bradi4g27310 0.5kb downstream 0.5kb downstream 11010 true Bd4: 32323263-32334272 Brachypodium distachyon
Bradi4g27310 0.5kb downstream 0.5kb downstream 500 false Bd4: 32323263-32323762 Brachypodium distachyon
Bradi4g27310 1.0kb upstream 1.0kb upstream 11510 true Bd4: 32323763-32335272 Brachypodium distachyon
Bradi4g27310 1.0kb upstream 1.0kb upstream 1000 false Bd4: 32334273-32335272 Brachypodium distachyon
Bradi4g27310 1.0kb downstream 1.0kb downstream 11510 true Bd4: 32322763-32334272 Brachypodium distachyon
Bradi4g27310 1.0kb downstream 1.0kb downstream 1000 false Bd4: 32322763-32323762 Brachypodium distachyon
Bradi4g27310 2.0kb upstream 2.0kb upstream 12510 true Bd4: 32323763-32336272 Brachypodium distachyon
Bradi4g27310 2.0kb upstream 2.0kb upstream 2000 false Bd4: 32334273-32336272 Brachypodium distachyon
Bradi4g27310 2.0kb downstream 2.0kb downstream 12510 true Bd4: 32321763-32334272 Brachypodium distachyon
Bradi4g27310 2.0kb downstream 2.0kb downstream 2000 false Bd4: 32321763-32323762 Brachypodium distachyon
Bradi4g27310 5.0kb upstream 5.0kb upstream 15510 true Bd4: 32323763-32339272 Brachypodium distachyon
Bradi4g27310 5.0kb upstream 5.0kb upstream 5000 false Bd4: 32334273-32339272 Brachypodium distachyon
Bradi4g27310 5.0kb downstream 5.0kb downstream 15510 true Bd4: 32318763-32334272 Brachypodium distachyon
Bradi4g27310 5.0kb downstream 5.0kb downstream 5000 false Bd4: 32318763-32323762 Brachypodium distachyon
Bradi4g27310 10.0kb upstream 10.0kb upstream 20510 true Bd4: 32323763-32344272 Brachypodium distachyon
Bradi4g27310 10.0kb upstream 10.0kb upstream 10000 false Bd4: 32334273-32344272 Brachypodium distachyon
Bradi4g27310 10.0kb downstream 10.0kb downstream 20510 true Bd4: 32313763-32334272 Brachypodium distachyon
Bradi4g27310 10.0kb downstream 10.0kb downstream 10000 false Bd4: 32313763-32323762 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579559 5269 Grass View MSA
122042173 5273 Angiosperm View MSA
121348328 5274 Embryophyte View MSA
123380822 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.156       Low
cufflinks 0.337        
cufflinks 0.319        
cufflinks 0.338        
cufflinks 0.131       Low
cufflinks 0.36        
cufflinks 0.337        
cufflinks 0.206        
cufflinks 0.303        
cufflinks 0.199        
cufflinks 0.274        
cufflinks 0.289        
cufflinks 0.271        
cufflinks 0.248        
cufflinks 0.185        
cufflinks 0.28        
cufflinks 0.191        
cufflinks 0.602       High
cufflinks 0.235        
cufflinks 0.147       Low
cufflinks 0.236        
cufflinks 0.219        
cufflinks 0.221        
cufflinks 0.271        
cufflinks 0.273        
cufflinks 0.295        
cufflinks 0.391       High
cufflinks 0.303        
cufflinks 0.217        
cufflinks 0.365        

0 Strain