Gene : Bradi4g27370 B. distachyon v3.1
Defline:  (1 of 1) PTHR23029:SF49 - PHOSPHOHISTIDINE PHOSPHATASE SIXA Genomic Order:  3483
Name:  ? Bradi4g27370 Secondary Identifier:  ? PAC:32786361
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g27370 0.5kb upstream 0.5kb upstream 5512 true Bd4: 32393844-32399355 Brachypodium distachyon
Bradi4g27370 0.5kb upstream 0.5kb upstream 500 false Bd4: 32398856-32399355 Brachypodium distachyon
Bradi4g27370 0.5kb downstream 0.5kb downstream 5512 true Bd4: 32393344-32398855 Brachypodium distachyon
Bradi4g27370 0.5kb downstream 0.5kb downstream 500 false Bd4: 32393344-32393843 Brachypodium distachyon
Bradi4g27370 1.0kb upstream 1.0kb upstream 6012 true Bd4: 32393844-32399855 Brachypodium distachyon
Bradi4g27370 1.0kb upstream 1.0kb upstream 1000 false Bd4: 32398856-32399855 Brachypodium distachyon
Bradi4g27370 1.0kb downstream 1.0kb downstream 6012 true Bd4: 32392844-32398855 Brachypodium distachyon
Bradi4g27370 1.0kb downstream 1.0kb downstream 1000 false Bd4: 32392844-32393843 Brachypodium distachyon
Bradi4g27370 2.0kb upstream 2.0kb upstream 7012 true Bd4: 32393844-32400855 Brachypodium distachyon
Bradi4g27370 2.0kb upstream 2.0kb upstream 2000 false Bd4: 32398856-32400855 Brachypodium distachyon
Bradi4g27370 2.0kb downstream 2.0kb downstream 7012 true Bd4: 32391844-32398855 Brachypodium distachyon
Bradi4g27370 2.0kb downstream 2.0kb downstream 2000 false Bd4: 32391844-32393843 Brachypodium distachyon
Bradi4g27370 5.0kb upstream 5.0kb upstream 10012 true Bd4: 32393844-32403855 Brachypodium distachyon
Bradi4g27370 5.0kb upstream 5.0kb upstream 5000 false Bd4: 32398856-32403855 Brachypodium distachyon
Bradi4g27370 5.0kb downstream 5.0kb downstream 10012 true Bd4: 32388844-32398855 Brachypodium distachyon
Bradi4g27370 5.0kb downstream 5.0kb downstream 5000 false Bd4: 32388844-32393843 Brachypodium distachyon
Bradi4g27370 10.0kb upstream 10.0kb upstream 15012 true Bd4: 32393844-32408855 Brachypodium distachyon
Bradi4g27370 10.0kb upstream 10.0kb upstream 10000 false Bd4: 32398856-32408855 Brachypodium distachyon
Bradi4g27370 10.0kb downstream 10.0kb downstream 15012 true Bd4: 32383844-32398855 Brachypodium distachyon
Bradi4g27370 10.0kb downstream 10.0kb downstream 10000 false Bd4: 32383844-32393843 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582314 5269 Grass View MSA
122043968 5273 Angiosperm View MSA
121345755 5274 Embryophyte View MSA
123426620 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.5        
cufflinks 7.171        
cufflinks 7.128        
cufflinks 7.976       High
cufflinks 3.499        
cufflinks 5.719        
cufflinks 6.748        
cufflinks 5.406        
cufflinks 5.823        
cufflinks 6.416        
cufflinks 6.502        
cufflinks 4.744        
cufflinks 4.124        
cufflinks 5.702        
cufflinks 3.45        
cufflinks 6.142        
cufflinks 5.989        
cufflinks 1.795       Low
cufflinks 5.155        
cufflinks 3.476        
cufflinks 5.311        
cufflinks 5.469        
cufflinks 5.238        
cufflinks 5.723        
cufflinks 6.597        
cufflinks 7.025        
cufflinks 3.76        
cufflinks 7.195        
cufflinks 7.323        
cufflinks 5.245        

0 Strain