Gene : Bradi4g27570 B. distachyon v3.1
Defline:  (1 of 2) PTHR22572//PTHR22572:SF101 - SUGAR-1-PHOSPHATE GUANYL TRANSFERASE // GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE SMALL SUBUNIT, CHLOROPLASTIC Genomic Order:  3511
Name:  ? Bradi4g27570 Secondary Identifier:  ? PAC:32783382
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon GLYCOGENSYNTH-PWY Brachypodium distachyon pathologic  
Bdistachyon PWY-622 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g27570 0.5kb upstream 0.5kb upstream 4984 true Bd4: 32623368-32628351 Brachypodium distachyon
Bradi4g27570 0.5kb upstream 0.5kb upstream 500 false Bd4: 32627852-32628351 Brachypodium distachyon
Bradi4g27570 0.5kb downstream 0.5kb downstream 4984 true Bd4: 32622868-32627851 Brachypodium distachyon
Bradi4g27570 0.5kb downstream 0.5kb downstream 500 false Bd4: 32622868-32623367 Brachypodium distachyon
Bradi4g27570 1.0kb upstream 1.0kb upstream 5484 true Bd4: 32623368-32628851 Brachypodium distachyon
Bradi4g27570 1.0kb upstream 1.0kb upstream 1000 false Bd4: 32627852-32628851 Brachypodium distachyon
Bradi4g27570 1.0kb downstream 1.0kb downstream 5484 true Bd4: 32622368-32627851 Brachypodium distachyon
Bradi4g27570 1.0kb downstream 1.0kb downstream 1000 false Bd4: 32622368-32623367 Brachypodium distachyon
Bradi4g27570 2.0kb upstream 2.0kb upstream 6484 true Bd4: 32623368-32629851 Brachypodium distachyon
Bradi4g27570 2.0kb upstream 2.0kb upstream 2000 false Bd4: 32627852-32629851 Brachypodium distachyon
Bradi4g27570 2.0kb downstream 2.0kb downstream 6484 true Bd4: 32621368-32627851 Brachypodium distachyon
Bradi4g27570 2.0kb downstream 2.0kb downstream 2000 false Bd4: 32621368-32623367 Brachypodium distachyon
Bradi4g27570 5.0kb upstream 5.0kb upstream 9484 true Bd4: 32623368-32632851 Brachypodium distachyon
Bradi4g27570 5.0kb upstream 5.0kb upstream 5000 false Bd4: 32627852-32632851 Brachypodium distachyon
Bradi4g27570 5.0kb downstream 5.0kb downstream 9484 true Bd4: 32618368-32627851 Brachypodium distachyon
Bradi4g27570 5.0kb downstream 5.0kb downstream 5000 false Bd4: 32618368-32623367 Brachypodium distachyon
Bradi4g27570 10.0kb upstream 10.0kb upstream 14484 true Bd4: 32623368-32637851 Brachypodium distachyon
Bradi4g27570 10.0kb upstream 10.0kb upstream 10000 false Bd4: 32627852-32637851 Brachypodium distachyon
Bradi4g27570 10.0kb downstream 10.0kb downstream 14484 true Bd4: 32613368-32627851 Brachypodium distachyon
Bradi4g27570 10.0kb downstream 10.0kb downstream 10000 false Bd4: 32613368-32623367 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121993602 5273 Angiosperm View MSA
124580091 5269 Grass View MSA
121350002 5274 Embryophyte View MSA
123424956 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.584        
cufflinks 1.653        
cufflinks 0.928       Low
cufflinks 1.282        
cufflinks 1.932        
cufflinks 2.86        
cufflinks 2.137        
cufflinks 2.835        
cufflinks 3.346       High
cufflinks 2.355        
cufflinks 1.584        
cufflinks 2.577        
cufflinks 2.24        
cufflinks 1.62        
cufflinks 1.416        
cufflinks 1.882        
cufflinks 2.247        
cufflinks 1.467        
cufflinks 1.654        
cufflinks 1.124       Low
cufflinks 8.025       High
cufflinks 2.394        
cufflinks 3.331       High
cufflinks 3.602       High
cufflinks 3.575       High
cufflinks 0.868       Low
cufflinks 2.89        
cufflinks 0.999       Low
cufflinks 1.439        
cufflinks 5.412       High

0 Strain