Gene : Bradi3g00460 B. distachyon v3.1
Genomic Order:  37 Name:  ? Bradi3g00460
Secondary Identifier:  ? PAC:32817908
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g00460 0.5kb upstream 0.5kb upstream 2574 true Bd3: 205994-208567 Brachypodium distachyon
Bradi3g00460 0.5kb upstream 0.5kb upstream 500 false Bd3: 205994-206493 Brachypodium distachyon
Bradi3g00460 0.5kb downstream 0.5kb downstream 2574 true Bd3: 206494-209067 Brachypodium distachyon
Bradi3g00460 0.5kb downstream 0.5kb downstream 500 false Bd3: 208568-209067 Brachypodium distachyon
Bradi3g00460 1.0kb upstream 1.0kb upstream 3074 true Bd3: 205494-208567 Brachypodium distachyon
Bradi3g00460 1.0kb upstream 1.0kb upstream 1000 false Bd3: 205494-206493 Brachypodium distachyon
Bradi3g00460 1.0kb downstream 1.0kb downstream 3074 true Bd3: 206494-209567 Brachypodium distachyon
Bradi3g00460 1.0kb downstream 1.0kb downstream 1000 false Bd3: 208568-209567 Brachypodium distachyon
Bradi3g00460 2.0kb upstream 2.0kb upstream 4074 true Bd3: 204494-208567 Brachypodium distachyon
Bradi3g00460 2.0kb upstream 2.0kb upstream 2000 false Bd3: 204494-206493 Brachypodium distachyon
Bradi3g00460 2.0kb downstream 2.0kb downstream 4074 true Bd3: 206494-210567 Brachypodium distachyon
Bradi3g00460 2.0kb downstream 2.0kb downstream 2000 false Bd3: 208568-210567 Brachypodium distachyon
Bradi3g00460 5.0kb upstream 5.0kb upstream 7074 true Bd3: 201494-208567 Brachypodium distachyon
Bradi3g00460 5.0kb upstream 5.0kb upstream 5000 false Bd3: 201494-206493 Brachypodium distachyon
Bradi3g00460 5.0kb downstream 5.0kb downstream 7074 true Bd3: 206494-213567 Brachypodium distachyon
Bradi3g00460 5.0kb downstream 5.0kb downstream 5000 false Bd3: 208568-213567 Brachypodium distachyon
Bradi3g00460 10.0kb upstream 10.0kb upstream 12074 true Bd3: 196494-208567 Brachypodium distachyon
Bradi3g00460 10.0kb upstream 10.0kb upstream 10000 false Bd3: 196494-206493 Brachypodium distachyon
Bradi3g00460 10.0kb downstream 10.0kb downstream 12074 true Bd3: 206494-218567 Brachypodium distachyon
Bradi3g00460 10.0kb downstream 10.0kb downstream 10000 false Bd3: 208568-218567 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124590402 5269 Grass View MSA
122048825 5273 Angiosperm View MSA
121351710 5274 Embryophyte View MSA
123427809 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.617        
cufflinks 0.196        
cufflinks 0.367        
cufflinks 0.201        
cufflinks 0.907        
cufflinks 0.345        
cufflinks 0.236        
cufflinks 0.456        
cufflinks 0.309        
cufflinks 0.18        
cufflinks 0.28        
cufflinks 0.818        
cufflinks 0.058     Low Low
cufflinks 0.028     Low Low
cufflinks 0.498        
cufflinks 0.228        
cufflinks 0.416        
cufflinks 9.574       High
cufflinks 0.151     Low  
cufflinks 0.292        
cufflinks 0.154        
cufflinks 0.316        
cufflinks 0.6        
cufflinks 0.704        
cufflinks 0.303        
cufflinks 0.442        
cufflinks 0.012     Low Low
cufflinks 0.247        
cufflinks 0.28        
cufflinks 1.355       High

0 Strain