Gene : Bradi4g27550 B. distachyon v3.1
Defline:  (1 of 1) PTHR11132//PTHR11132:SF120 - SOLUTE CARRIER FAMILY 35 // SUBFAMILY NOT NAMED Genomic Order:  3509
Name:  ? Bradi4g27550 Secondary Identifier:  ? PAC:32790141
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g27550 0.5kb upstream 0.5kb upstream 4659 true Bd4: 32611997-32616655 Brachypodium distachyon
Bradi4g27550 0.5kb upstream 0.5kb upstream 500 false Bd4: 32616156-32616655 Brachypodium distachyon
Bradi4g27550 0.5kb downstream 0.5kb downstream 4659 true Bd4: 32611497-32616155 Brachypodium distachyon
Bradi4g27550 0.5kb downstream 0.5kb downstream 500 false Bd4: 32611497-32611996 Brachypodium distachyon
Bradi4g27550 1.0kb upstream 1.0kb upstream 5159 true Bd4: 32611997-32617155 Brachypodium distachyon
Bradi4g27550 1.0kb upstream 1.0kb upstream 1000 false Bd4: 32616156-32617155 Brachypodium distachyon
Bradi4g27550 1.0kb downstream 1.0kb downstream 5159 true Bd4: 32610997-32616155 Brachypodium distachyon
Bradi4g27550 1.0kb downstream 1.0kb downstream 1000 false Bd4: 32610997-32611996 Brachypodium distachyon
Bradi4g27550 2.0kb upstream 2.0kb upstream 6159 true Bd4: 32611997-32618155 Brachypodium distachyon
Bradi4g27550 2.0kb upstream 2.0kb upstream 2000 false Bd4: 32616156-32618155 Brachypodium distachyon
Bradi4g27550 2.0kb downstream 2.0kb downstream 6159 true Bd4: 32609997-32616155 Brachypodium distachyon
Bradi4g27550 2.0kb downstream 2.0kb downstream 2000 false Bd4: 32609997-32611996 Brachypodium distachyon
Bradi4g27550 5.0kb upstream 5.0kb upstream 9159 true Bd4: 32611997-32621155 Brachypodium distachyon
Bradi4g27550 5.0kb upstream 5.0kb upstream 5000 false Bd4: 32616156-32621155 Brachypodium distachyon
Bradi4g27550 5.0kb downstream 5.0kb downstream 9159 true Bd4: 32606997-32616155 Brachypodium distachyon
Bradi4g27550 5.0kb downstream 5.0kb downstream 5000 false Bd4: 32606997-32611996 Brachypodium distachyon
Bradi4g27550 10.0kb upstream 10.0kb upstream 14159 true Bd4: 32611997-32626155 Brachypodium distachyon
Bradi4g27550 10.0kb upstream 10.0kb upstream 10000 false Bd4: 32616156-32626155 Brachypodium distachyon
Bradi4g27550 10.0kb downstream 10.0kb downstream 14159 true Bd4: 32601997-32616155 Brachypodium distachyon
Bradi4g27550 10.0kb downstream 10.0kb downstream 10000 false Bd4: 32601997-32611996 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574618 5269 Grass View MSA
122048545 5273 Angiosperm View MSA
121348201 5274 Embryophyte View MSA
123427296 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.802     High  
cufflinks 36.3     High  
cufflinks 34.882     High  
cufflinks 35.682     High  
cufflinks 19.769     High  
cufflinks 33.968     High  
cufflinks 33.092     High  
cufflinks 32.256     High  
cufflinks 32.425     High  
cufflinks 27.604     High  
cufflinks 7.205       Low
cufflinks 28.771     High  
cufflinks 5.595       Low
cufflinks 6.209       Low
cufflinks 12.478     High  
cufflinks 36.736     High  
cufflinks 38.055     High  
cufflinks 70.627     High High
cufflinks 40.987     High  
cufflinks 6.449       Low
cufflinks 50.023     High High
cufflinks 29.846     High  
cufflinks 27.13     High  
cufflinks 30.04     High  
cufflinks 33.989     High  
cufflinks 30.841     High  
cufflinks 6.769       Low
cufflinks 25.102     High  
cufflinks 25.346     High  
cufflinks 51.649     High High

0 Strain