Gene : Bradi4g27490 B. distachyon v3.1
Defline:  (1 of 3) 4.99.1.1 - Ferrochelatase / Protoheme ferro-lyase Genomic Order:  3505
Name:  ? Bradi4g27490 Secondary Identifier:  ? PAC:32785304
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon HEME-BIOSYNTHESIS-II Brachypodium distachyon pathologic  
Bdistachyon PWY-5918 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g27490 0.5kb upstream 0.5kb upstream 6019 true Bd4: 32555875-32561893 Brachypodium distachyon
Bradi4g27490 0.5kb upstream 0.5kb upstream 500 false Bd4: 32555875-32556374 Brachypodium distachyon
Bradi4g27490 0.5kb downstream 0.5kb downstream 6019 true Bd4: 32556375-32562393 Brachypodium distachyon
Bradi4g27490 0.5kb downstream 0.5kb downstream 500 false Bd4: 32561894-32562393 Brachypodium distachyon
Bradi4g27490 1.0kb upstream 1.0kb upstream 6519 true Bd4: 32555375-32561893 Brachypodium distachyon
Bradi4g27490 1.0kb upstream 1.0kb upstream 1000 false Bd4: 32555375-32556374 Brachypodium distachyon
Bradi4g27490 1.0kb downstream 1.0kb downstream 6519 true Bd4: 32556375-32562893 Brachypodium distachyon
Bradi4g27490 1.0kb downstream 1.0kb downstream 1000 false Bd4: 32561894-32562893 Brachypodium distachyon
Bradi4g27490 2.0kb upstream 2.0kb upstream 7519 true Bd4: 32554375-32561893 Brachypodium distachyon
Bradi4g27490 2.0kb upstream 2.0kb upstream 2000 false Bd4: 32554375-32556374 Brachypodium distachyon
Bradi4g27490 2.0kb downstream 2.0kb downstream 7519 true Bd4: 32556375-32563893 Brachypodium distachyon
Bradi4g27490 2.0kb downstream 2.0kb downstream 2000 false Bd4: 32561894-32563893 Brachypodium distachyon
Bradi4g27490 5.0kb upstream 5.0kb upstream 10519 true Bd4: 32551375-32561893 Brachypodium distachyon
Bradi4g27490 5.0kb upstream 5.0kb upstream 5000 false Bd4: 32551375-32556374 Brachypodium distachyon
Bradi4g27490 5.0kb downstream 5.0kb downstream 10519 true Bd4: 32556375-32566893 Brachypodium distachyon
Bradi4g27490 5.0kb downstream 5.0kb downstream 5000 false Bd4: 32561894-32566893 Brachypodium distachyon
Bradi4g27490 10.0kb upstream 10.0kb upstream 15519 true Bd4: 32546375-32561893 Brachypodium distachyon
Bradi4g27490 10.0kb upstream 10.0kb upstream 10000 false Bd4: 32546375-32556374 Brachypodium distachyon
Bradi4g27490 10.0kb downstream 10.0kb downstream 15519 true Bd4: 32556375-32571893 Brachypodium distachyon
Bradi4g27490 10.0kb downstream 10.0kb downstream 10000 false Bd4: 32561894-32571893 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577212 5269 Grass View MSA
122047545 5273 Angiosperm View MSA
121310756 5274 Embryophyte View MSA
123426598 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.321        
cufflinks 3.907        
cufflinks 3.163        
cufflinks 3.895        
cufflinks 12.275     High High
cufflinks 3.574        
cufflinks 3.303        
cufflinks 4.729        
cufflinks 3.549        
cufflinks 2.416       Low
cufflinks 3.074        
cufflinks 4.218        
cufflinks 3.01        
cufflinks 2.579       Low
cufflinks 9.711     High High
cufflinks 3.214        
cufflinks 4.306        
cufflinks 6.719        
cufflinks 11.075       High
cufflinks 15.142     High High
cufflinks 4.014        
cufflinks 3.048        
cufflinks 5.483        
cufflinks 4.355        
cufflinks 3.465        
cufflinks 3.236        
cufflinks 4.05        
cufflinks 2.781       Low
cufflinks 2.765       Low
cufflinks 4.838        

0 Strain