Gene : Bradi3g00792 B. distachyon v3.1
Defline:  (1 of 2) PTHR13402 - RGPR-RELATED Genomic Order:  78
Name:  ? Bradi3g00792 Secondary Identifier:  ? PAC:32820205
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g00792 0.5kb upstream 0.5kb upstream 8083 true Bd3: 445173-453255 Brachypodium distachyon
Bradi3g00792 0.5kb upstream 0.5kb upstream 500 false Bd3: 452756-453255 Brachypodium distachyon
Bradi3g00792 0.5kb downstream 0.5kb downstream 8083 true Bd3: 444673-452755 Brachypodium distachyon
Bradi3g00792 0.5kb downstream 0.5kb downstream 500 false Bd3: 444673-445172 Brachypodium distachyon
Bradi3g00792 1.0kb upstream 1.0kb upstream 8583 true Bd3: 445173-453755 Brachypodium distachyon
Bradi3g00792 1.0kb upstream 1.0kb upstream 1000 false Bd3: 452756-453755 Brachypodium distachyon
Bradi3g00792 1.0kb downstream 1.0kb downstream 8583 true Bd3: 444173-452755 Brachypodium distachyon
Bradi3g00792 1.0kb downstream 1.0kb downstream 1000 false Bd3: 444173-445172 Brachypodium distachyon
Bradi3g00792 2.0kb upstream 2.0kb upstream 9583 true Bd3: 445173-454755 Brachypodium distachyon
Bradi3g00792 2.0kb upstream 2.0kb upstream 2000 false Bd3: 452756-454755 Brachypodium distachyon
Bradi3g00792 2.0kb downstream 2.0kb downstream 9583 true Bd3: 443173-452755 Brachypodium distachyon
Bradi3g00792 2.0kb downstream 2.0kb downstream 2000 false Bd3: 443173-445172 Brachypodium distachyon
Bradi3g00792 5.0kb upstream 5.0kb upstream 12583 true Bd3: 445173-457755 Brachypodium distachyon
Bradi3g00792 5.0kb upstream 5.0kb upstream 5000 false Bd3: 452756-457755 Brachypodium distachyon
Bradi3g00792 5.0kb downstream 5.0kb downstream 12583 true Bd3: 440173-452755 Brachypodium distachyon
Bradi3g00792 5.0kb downstream 5.0kb downstream 5000 false Bd3: 440173-445172 Brachypodium distachyon
Bradi3g00792 10.0kb upstream 10.0kb upstream 17583 true Bd3: 445173-462755 Brachypodium distachyon
Bradi3g00792 10.0kb upstream 10.0kb upstream 10000 false Bd3: 452756-462755 Brachypodium distachyon
Bradi3g00792 10.0kb downstream 10.0kb downstream 17583 true Bd3: 435173-452755 Brachypodium distachyon
Bradi3g00792 10.0kb downstream 10.0kb downstream 10000 false Bd3: 435173-445172 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577352 5269 Grass View MSA
122051498 5273 Angiosperm View MSA
121349781 5274 Embryophyte View MSA
123425826 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.517        
cufflinks 10.285     High  
cufflinks 11.637     High High
cufflinks 6.721        
cufflinks 2.231       Low
cufflinks 8.458        
cufflinks 8.049        
cufflinks 7.371        
cufflinks 8.836        
cufflinks 3.913        
cufflinks 5.917        
cufflinks 8.456        
cufflinks 4.421        
cufflinks 3.541        
cufflinks 4.439        
cufflinks 8.806        
cufflinks 3.144        
cufflinks 17.483     High High
cufflinks 4.825        
cufflinks 1.039       Low
cufflinks 6.606        
cufflinks 11.036     High  
cufflinks 7.361        
cufflinks 6.351        
cufflinks 5.637        
cufflinks 9.503        
cufflinks 6.251        
cufflinks 8.995        
cufflinks 8.879        
cufflinks 11.082        

0 Strain