Gene : Bradi3g00956 B. distachyon v3.1
Defline:  (1 of 4) PTHR32099//PTHR32099:SF8 - CYSTEINE-RICH REPEAT SECRETORY PROTEIN Genomic Order:  100
Name:  ? Bradi3g00956 Secondary Identifier:  ? PAC:32813466
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g00956 0.5kb upstream 0.5kb upstream 4063 true Bd3: 566374-570436 Brachypodium distachyon
Bradi3g00956 0.5kb upstream 0.5kb upstream 500 false Bd3: 569937-570436 Brachypodium distachyon
Bradi3g00956 0.5kb downstream 0.5kb downstream 4063 true Bd3: 565874-569936 Brachypodium distachyon
Bradi3g00956 0.5kb downstream 0.5kb downstream 500 false Bd3: 565874-566373 Brachypodium distachyon
Bradi3g00956 1.0kb upstream 1.0kb upstream 4563 true Bd3: 566374-570936 Brachypodium distachyon
Bradi3g00956 1.0kb upstream 1.0kb upstream 1000 false Bd3: 569937-570936 Brachypodium distachyon
Bradi3g00956 1.0kb downstream 1.0kb downstream 4563 true Bd3: 565374-569936 Brachypodium distachyon
Bradi3g00956 1.0kb downstream 1.0kb downstream 1000 false Bd3: 565374-566373 Brachypodium distachyon
Bradi3g00956 2.0kb upstream 2.0kb upstream 5563 true Bd3: 566374-571936 Brachypodium distachyon
Bradi3g00956 2.0kb upstream 2.0kb upstream 2000 false Bd3: 569937-571936 Brachypodium distachyon
Bradi3g00956 2.0kb downstream 2.0kb downstream 5563 true Bd3: 564374-569936 Brachypodium distachyon
Bradi3g00956 2.0kb downstream 2.0kb downstream 2000 false Bd3: 564374-566373 Brachypodium distachyon
Bradi3g00956 5.0kb upstream 5.0kb upstream 8563 true Bd3: 566374-574936 Brachypodium distachyon
Bradi3g00956 5.0kb upstream 5.0kb upstream 5000 false Bd3: 569937-574936 Brachypodium distachyon
Bradi3g00956 5.0kb downstream 5.0kb downstream 8563 true Bd3: 561374-569936 Brachypodium distachyon
Bradi3g00956 5.0kb downstream 5.0kb downstream 5000 false Bd3: 561374-566373 Brachypodium distachyon
Bradi3g00956 10.0kb upstream 10.0kb upstream 13563 true Bd3: 566374-579936 Brachypodium distachyon
Bradi3g00956 10.0kb upstream 10.0kb upstream 10000 false Bd3: 569937-579936 Brachypodium distachyon
Bradi3g00956 10.0kb downstream 10.0kb downstream 13563 true Bd3: 556374-569936 Brachypodium distachyon
Bradi3g00956 10.0kb downstream 10.0kb downstream 10000 false Bd3: 556374-566373 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121995680 5273 Angiosperm View MSA
124589227 5269 Grass View MSA
121265866 5274 Embryophyte View MSA
123304228 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.035     Low  
cufflinks 0.048     Low  
cufflinks 0.059     Low  
cufflinks 0.078     Low  
cufflinks 0.031     Low  
cufflinks 0.064     Low  
cufflinks 0.08     Low  
cufflinks 0.076     Low  
cufflinks 0.106     Low  
cufflinks 0.018     Low Low
cufflinks 0.009     Low Low
cufflinks 0.005     Low Low
cufflinks 0.01     Low Low
cufflinks 0.039     Low  
cufflinks 0.009     Low Low
cufflinks 0.031     Low  
cufflinks 0.067     Low  
cufflinks 0.408       High
cufflinks 0.056     Low  
cufflinks 0.078     Low  
cufflinks 0.063     Low  
cufflinks 0.079     Low  
cufflinks 0.041     Low  
cufflinks 0.019     Low Low
cufflinks 0.057     Low  
cufflinks 0.028     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.054     Low  
cufflinks 0.034     Low  
cufflinks 0.093     Low  

0 Strain