Gene : Bradi4g27777 B. distachyon v3.1
Defline:  (1 of 2) PTHR13038 - APG9 AUTOPHAGY 9 Genomic Order:  3543
Name:  ? Bradi4g27777 Secondary Identifier:  ? PAC:32786918
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g27777 0.5kb upstream 0.5kb upstream 8184 true Bd4: 32883018-32891201 Brachypodium distachyon
Bradi4g27777 0.5kb upstream 0.5kb upstream 500 false Bd4: 32883018-32883517 Brachypodium distachyon
Bradi4g27777 0.5kb downstream 0.5kb downstream 8184 true Bd4: 32883518-32891701 Brachypodium distachyon
Bradi4g27777 0.5kb downstream 0.5kb downstream 500 false Bd4: 32891202-32891701 Brachypodium distachyon
Bradi4g27777 1.0kb upstream 1.0kb upstream 8684 true Bd4: 32882518-32891201 Brachypodium distachyon
Bradi4g27777 1.0kb upstream 1.0kb upstream 1000 false Bd4: 32882518-32883517 Brachypodium distachyon
Bradi4g27777 1.0kb downstream 1.0kb downstream 8684 true Bd4: 32883518-32892201 Brachypodium distachyon
Bradi4g27777 1.0kb downstream 1.0kb downstream 1000 false Bd4: 32891202-32892201 Brachypodium distachyon
Bradi4g27777 2.0kb upstream 2.0kb upstream 9684 true Bd4: 32881518-32891201 Brachypodium distachyon
Bradi4g27777 2.0kb upstream 2.0kb upstream 2000 false Bd4: 32881518-32883517 Brachypodium distachyon
Bradi4g27777 2.0kb downstream 2.0kb downstream 9684 true Bd4: 32883518-32893201 Brachypodium distachyon
Bradi4g27777 2.0kb downstream 2.0kb downstream 2000 false Bd4: 32891202-32893201 Brachypodium distachyon
Bradi4g27777 5.0kb upstream 5.0kb upstream 12684 true Bd4: 32878518-32891201 Brachypodium distachyon
Bradi4g27777 5.0kb upstream 5.0kb upstream 5000 false Bd4: 32878518-32883517 Brachypodium distachyon
Bradi4g27777 5.0kb downstream 5.0kb downstream 12684 true Bd4: 32883518-32896201 Brachypodium distachyon
Bradi4g27777 5.0kb downstream 5.0kb downstream 5000 false Bd4: 32891202-32896201 Brachypodium distachyon
Bradi4g27777 10.0kb upstream 10.0kb upstream 17684 true Bd4: 32873518-32891201 Brachypodium distachyon
Bradi4g27777 10.0kb upstream 10.0kb upstream 10000 false Bd4: 32873518-32883517 Brachypodium distachyon
Bradi4g27777 10.0kb downstream 10.0kb downstream 17684 true Bd4: 32883518-32901201 Brachypodium distachyon
Bradi4g27777 10.0kb downstream 10.0kb downstream 10000 false Bd4: 32891202-32901201 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579747 5269 Grass View MSA
122044754 5273 Angiosperm View MSA
121345191 5274 Embryophyte View MSA
123424941 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.101        
cufflinks 2.595        
cufflinks 2.821        
cufflinks 1.883        
cufflinks 0.479       Low
cufflinks 2.08        
cufflinks 2.165        
cufflinks 1.871        
cufflinks 2.119        
cufflinks 1.16        
cufflinks 2.292        
cufflinks 2.395        
cufflinks 1.997        
cufflinks 1.67        
cufflinks 1.671        
cufflinks 2.361        
cufflinks 0.807        
cufflinks 2.139        
cufflinks 0.754       Low
cufflinks 0.1     Low Low
cufflinks 1.16        
cufflinks 2.767        
cufflinks 2.027        
cufflinks 1.774        
cufflinks 1.738        
cufflinks 2.303        
cufflinks 1.88        
cufflinks 2.249        
cufflinks 2.43        
cufflinks 2.144        

0 Strain