Gene : Bradi2g58660 B. distachyon v3.1
Defline:  (1 of 1) PTHR22780:SF13 - AP-4 COMPLEX SUBUNIT EPSILON-1 Genomic Order:  7086
Name:  ? Bradi2g58660 Secondary Identifier:  ? PAC:32780242
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g58660 0.5kb upstream 0.5kb upstream 8693 true Bd2: 56269599-56278291 Brachypodium distachyon
Bradi2g58660 0.5kb upstream 0.5kb upstream 500 false Bd2: 56277792-56278291 Brachypodium distachyon
Bradi2g58660 0.5kb downstream 0.5kb downstream 8693 true Bd2: 56269099-56277791 Brachypodium distachyon
Bradi2g58660 0.5kb downstream 0.5kb downstream 500 false Bd2: 56269099-56269598 Brachypodium distachyon
Bradi2g58660 1.0kb upstream 1.0kb upstream 9193 true Bd2: 56269599-56278791 Brachypodium distachyon
Bradi2g58660 1.0kb upstream 1.0kb upstream 1000 false Bd2: 56277792-56278791 Brachypodium distachyon
Bradi2g58660 1.0kb downstream 1.0kb downstream 9193 true Bd2: 56268599-56277791 Brachypodium distachyon
Bradi2g58660 1.0kb downstream 1.0kb downstream 1000 false Bd2: 56268599-56269598 Brachypodium distachyon
Bradi2g58660 2.0kb upstream 2.0kb upstream 10193 true Bd2: 56269599-56279791 Brachypodium distachyon
Bradi2g58660 2.0kb upstream 2.0kb upstream 2000 false Bd2: 56277792-56279791 Brachypodium distachyon
Bradi2g58660 2.0kb downstream 2.0kb downstream 10193 true Bd2: 56267599-56277791 Brachypodium distachyon
Bradi2g58660 2.0kb downstream 2.0kb downstream 2000 false Bd2: 56267599-56269598 Brachypodium distachyon
Bradi2g58660 5.0kb upstream 5.0kb upstream 13193 true Bd2: 56269599-56282791 Brachypodium distachyon
Bradi2g58660 5.0kb upstream 5.0kb upstream 5000 false Bd2: 56277792-56282791 Brachypodium distachyon
Bradi2g58660 5.0kb downstream 5.0kb downstream 13193 true Bd2: 56264599-56277791 Brachypodium distachyon
Bradi2g58660 5.0kb downstream 5.0kb downstream 5000 false Bd2: 56264599-56269598 Brachypodium distachyon
Bradi2g58660 10.0kb upstream 10.0kb upstream 18193 true Bd2: 56269599-56287791 Brachypodium distachyon
Bradi2g58660 10.0kb upstream 10.0kb upstream 10000 false Bd2: 56277792-56287791 Brachypodium distachyon
Bradi2g58660 10.0kb downstream 10.0kb downstream 18193 true Bd2: 56259599-56277791 Brachypodium distachyon
Bradi2g58660 10.0kb downstream 10.0kb downstream 10000 false Bd2: 56259599-56269598 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571663 5269 Grass View MSA
122045484 5273 Angiosperm View MSA
121344174 5274 Embryophyte View MSA
123427678 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.382        
cufflinks 8.185        
cufflinks 10.066       High
cufflinks 6.204        
cufflinks 4.901        
cufflinks 7.099        
cufflinks 7.351        
cufflinks 6.408        
cufflinks 6.802        
cufflinks 5.505        
cufflinks 4.881        
cufflinks 7.175        
cufflinks 3.639       Low
cufflinks 3.435       Low
cufflinks 4.63        
cufflinks 7.694        
cufflinks 5.159        
cufflinks 15.52     High High
cufflinks 9.68       High
cufflinks 3.195       Low
cufflinks 7.457        
cufflinks 9.155        
cufflinks 6.185        
cufflinks 6.148        
cufflinks 5.751        
cufflinks 9.154        
cufflinks 4.458        
cufflinks 9.397        
cufflinks 8.38        
cufflinks 9.915       High

0 Strain