Gene : Bradi2g58580 B. distachyon v3.1
Defline:  (1 of 2) PTHR32285:SF18 - PROTEIN YLS7-RELATED Genomic Order:  7076
Name:  ? Bradi2g58580 Secondary Identifier:  ? PAC:32771411
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g58580 0.5kb upstream 0.5kb upstream 3886 true Bd2: 56204927-56208812 Brachypodium distachyon
Bradi2g58580 0.5kb upstream 0.5kb upstream 500 false Bd2: 56204927-56205426 Brachypodium distachyon
Bradi2g58580 0.5kb downstream 0.5kb downstream 3886 true Bd2: 56205427-56209312 Brachypodium distachyon
Bradi2g58580 0.5kb downstream 0.5kb downstream 500 false Bd2: 56208813-56209312 Brachypodium distachyon
Bradi2g58580 1.0kb upstream 1.0kb upstream 4386 true Bd2: 56204427-56208812 Brachypodium distachyon
Bradi2g58580 1.0kb upstream 1.0kb upstream 1000 false Bd2: 56204427-56205426 Brachypodium distachyon
Bradi2g58580 1.0kb downstream 1.0kb downstream 4386 true Bd2: 56205427-56209812 Brachypodium distachyon
Bradi2g58580 1.0kb downstream 1.0kb downstream 1000 false Bd2: 56208813-56209812 Brachypodium distachyon
Bradi2g58580 2.0kb upstream 2.0kb upstream 5386 true Bd2: 56203427-56208812 Brachypodium distachyon
Bradi2g58580 2.0kb upstream 2.0kb upstream 2000 false Bd2: 56203427-56205426 Brachypodium distachyon
Bradi2g58580 2.0kb downstream 2.0kb downstream 5386 true Bd2: 56205427-56210812 Brachypodium distachyon
Bradi2g58580 2.0kb downstream 2.0kb downstream 2000 false Bd2: 56208813-56210812 Brachypodium distachyon
Bradi2g58580 5.0kb upstream 5.0kb upstream 8386 true Bd2: 56200427-56208812 Brachypodium distachyon
Bradi2g58580 5.0kb upstream 5.0kb upstream 5000 false Bd2: 56200427-56205426 Brachypodium distachyon
Bradi2g58580 5.0kb downstream 5.0kb downstream 8386 true Bd2: 56205427-56213812 Brachypodium distachyon
Bradi2g58580 5.0kb downstream 5.0kb downstream 5000 false Bd2: 56208813-56213812 Brachypodium distachyon
Bradi2g58580 10.0kb upstream 10.0kb upstream 13386 true Bd2: 56195427-56208812 Brachypodium distachyon
Bradi2g58580 10.0kb upstream 10.0kb upstream 10000 false Bd2: 56195427-56205426 Brachypodium distachyon
Bradi2g58580 10.0kb downstream 10.0kb downstream 13386 true Bd2: 56205427-56218812 Brachypodium distachyon
Bradi2g58580 10.0kb downstream 10.0kb downstream 10000 false Bd2: 56208813-56218812 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584206 5269 Grass View MSA
122043829 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121345496 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.32        
cufflinks 6.249        
cufflinks 5.548        
cufflinks 5.168        
cufflinks 3.93       Low
cufflinks 7.372        
cufflinks 6.314        
cufflinks 6.956        
cufflinks 7.611        
cufflinks 4.594        
cufflinks 4.126       Low
cufflinks 8.453       High
cufflinks 4.62        
cufflinks 5.224        
cufflinks 8.318       High
cufflinks 6.786        
cufflinks 5.851        
cufflinks 10.226       High
cufflinks 6.165        
cufflinks 4.586        
cufflinks 8.101        
cufflinks 6.209        
cufflinks 7.099        
cufflinks 8.609       High
cufflinks 7.933        
cufflinks 4.905        
cufflinks 5.821        
cufflinks 4.756        
cufflinks 5.478        
cufflinks 9.609       High

0 Strain