Gene : Bradi2g58840 B. distachyon v3.1
Genomic Order:  7112 Name:  ? Bradi2g58840
Secondary Identifier:  ? PAC:32779192
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g58840 0.5kb upstream 0.5kb upstream 4864 true Bd2: 56428772-56433635 Brachypodium distachyon
Bradi2g58840 0.5kb upstream 0.5kb upstream 500 false Bd2: 56433136-56433635 Brachypodium distachyon
Bradi2g58840 0.5kb downstream 0.5kb downstream 4864 true Bd2: 56428272-56433135 Brachypodium distachyon
Bradi2g58840 0.5kb downstream 0.5kb downstream 500 false Bd2: 56428272-56428771 Brachypodium distachyon
Bradi2g58840 1.0kb upstream 1.0kb upstream 5364 true Bd2: 56428772-56434135 Brachypodium distachyon
Bradi2g58840 1.0kb upstream 1.0kb upstream 1000 false Bd2: 56433136-56434135 Brachypodium distachyon
Bradi2g58840 1.0kb downstream 1.0kb downstream 5364 true Bd2: 56427772-56433135 Brachypodium distachyon
Bradi2g58840 1.0kb downstream 1.0kb downstream 1000 false Bd2: 56427772-56428771 Brachypodium distachyon
Bradi2g58840 2.0kb upstream 2.0kb upstream 6364 true Bd2: 56428772-56435135 Brachypodium distachyon
Bradi2g58840 2.0kb upstream 2.0kb upstream 2000 false Bd2: 56433136-56435135 Brachypodium distachyon
Bradi2g58840 2.0kb downstream 2.0kb downstream 6364 true Bd2: 56426772-56433135 Brachypodium distachyon
Bradi2g58840 2.0kb downstream 2.0kb downstream 2000 false Bd2: 56426772-56428771 Brachypodium distachyon
Bradi2g58840 5.0kb upstream 5.0kb upstream 9364 true Bd2: 56428772-56438135 Brachypodium distachyon
Bradi2g58840 5.0kb upstream 5.0kb upstream 5000 false Bd2: 56433136-56438135 Brachypodium distachyon
Bradi2g58840 5.0kb downstream 5.0kb downstream 9364 true Bd2: 56423772-56433135 Brachypodium distachyon
Bradi2g58840 5.0kb downstream 5.0kb downstream 5000 false Bd2: 56423772-56428771 Brachypodium distachyon
Bradi2g58840 10.0kb upstream 10.0kb upstream 14364 true Bd2: 56428772-56443135 Brachypodium distachyon
Bradi2g58840 10.0kb upstream 10.0kb upstream 10000 false Bd2: 56433136-56443135 Brachypodium distachyon
Bradi2g58840 10.0kb downstream 10.0kb downstream 14364 true Bd2: 56418772-56433135 Brachypodium distachyon
Bradi2g58840 10.0kb downstream 10.0kb downstream 10000 false Bd2: 56418772-56428771 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583318 5269 Grass View MSA
122044546 5273 Angiosperm View MSA
121348602 5274 Embryophyte View MSA
123428553 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.114        
cufflinks 0.269        
cufflinks 0.292        
cufflinks 0.268        
cufflinks 0.067     Low Low
cufflinks 0.236        
cufflinks 0.257        
cufflinks 0.219        
cufflinks 0.214        
cufflinks 0.22        
cufflinks 0.175        
cufflinks 0.231        
cufflinks 0.189        
cufflinks 0.172        
cufflinks 0.152        
cufflinks 0.259        
cufflinks 0.181        
cufflinks 0.281        
cufflinks 0.157     Low  
cufflinks 0.036     Low Low
cufflinks 0.167        
cufflinks 0.264        
cufflinks 0.19        
cufflinks 0.244        
cufflinks 0.221        
cufflinks 0.264        
cufflinks 0.203        
cufflinks 0.25        
cufflinks 0.239        
cufflinks 0.261        

0 Strain