Gene : Bradi4g23417 B. distachyon v3.1
Defline:  (1 of 1) PTHR13561:SF20 - MUTAGEN-SENSITIVE 101 Genomic Order:  2967
Name:  ? Bradi4g23417 Secondary Identifier:  ? PAC:32786887
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g23417 0.5kb upstream 0.5kb upstream 15327 true Bd4: 28150525-28165851 Brachypodium distachyon
Bradi4g23417 0.5kb upstream 0.5kb upstream 500 false Bd4: 28150525-28151024 Brachypodium distachyon
Bradi4g23417 0.5kb downstream 0.5kb downstream 15327 true Bd4: 28151025-28166351 Brachypodium distachyon
Bradi4g23417 0.5kb downstream 0.5kb downstream 500 false Bd4: 28165852-28166351 Brachypodium distachyon
Bradi4g23417 1.0kb upstream 1.0kb upstream 15827 true Bd4: 28150025-28165851 Brachypodium distachyon
Bradi4g23417 1.0kb upstream 1.0kb upstream 1000 false Bd4: 28150025-28151024 Brachypodium distachyon
Bradi4g23417 1.0kb downstream 1.0kb downstream 15827 true Bd4: 28151025-28166851 Brachypodium distachyon
Bradi4g23417 1.0kb downstream 1.0kb downstream 1000 false Bd4: 28165852-28166851 Brachypodium distachyon
Bradi4g23417 2.0kb upstream 2.0kb upstream 16827 true Bd4: 28149025-28165851 Brachypodium distachyon
Bradi4g23417 2.0kb upstream 2.0kb upstream 2000 false Bd4: 28149025-28151024 Brachypodium distachyon
Bradi4g23417 2.0kb downstream 2.0kb downstream 16827 true Bd4: 28151025-28167851 Brachypodium distachyon
Bradi4g23417 2.0kb downstream 2.0kb downstream 2000 false Bd4: 28165852-28167851 Brachypodium distachyon
Bradi4g23417 5.0kb upstream 5.0kb upstream 19827 true Bd4: 28146025-28165851 Brachypodium distachyon
Bradi4g23417 5.0kb upstream 5.0kb upstream 5000 false Bd4: 28146025-28151024 Brachypodium distachyon
Bradi4g23417 5.0kb downstream 5.0kb downstream 19827 true Bd4: 28151025-28170851 Brachypodium distachyon
Bradi4g23417 5.0kb downstream 5.0kb downstream 5000 false Bd4: 28165852-28170851 Brachypodium distachyon
Bradi4g23417 10.0kb upstream 10.0kb upstream 24827 true Bd4: 28141025-28165851 Brachypodium distachyon
Bradi4g23417 10.0kb upstream 10.0kb upstream 10000 false Bd4: 28141025-28151024 Brachypodium distachyon
Bradi4g23417 10.0kb downstream 10.0kb downstream 24827 true Bd4: 28151025-28175851 Brachypodium distachyon
Bradi4g23417 10.0kb downstream 10.0kb downstream 10000 false Bd4: 28165852-28175851 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569134 5269 Grass View MSA
122043112 5273 Angiosperm View MSA
121348037 5274 Embryophyte View MSA
123425629 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.302        
cufflinks 0.321        
cufflinks 0.392       High
cufflinks 0.278        
cufflinks 0.143       Low
cufflinks 0.217        
cufflinks 0.218        
cufflinks 0.208        
cufflinks 0.237        
cufflinks 0.236        
cufflinks 0.309        
cufflinks 0.237        
cufflinks 0.162       Low
cufflinks 0.159       Low
cufflinks 0.16       Low
cufflinks 0.237        
cufflinks 0.161     Low Low
cufflinks 0.481       High
cufflinks 0.146     Low Low
cufflinks 0.214        
cufflinks 0.201        
cufflinks 0.398       High
cufflinks 0.221        
cufflinks 0.189        
cufflinks 0.207        
cufflinks 0.31        
cufflinks 0.196        
cufflinks 0.327        
cufflinks 0.33        
cufflinks 0.278        

0 Strain