Gene : Bradi2g58820 B. distachyon v3.1
Defline:  (1 of 1) PTHR33385:SF4 - PROTEIN XRI1 Genomic Order:  7109
Name:  ? Bradi2g58820 Secondary Identifier:  ? PAC:32778254
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g58820 0.5kb upstream 0.5kb upstream 4267 true Bd2: 56407961-56412227 Brachypodium distachyon
Bradi2g58820 0.5kb upstream 0.5kb upstream 500 false Bd2: 56411728-56412227 Brachypodium distachyon
Bradi2g58820 0.5kb downstream 0.5kb downstream 4267 true Bd2: 56407461-56411727 Brachypodium distachyon
Bradi2g58820 0.5kb downstream 0.5kb downstream 500 false Bd2: 56407461-56407960 Brachypodium distachyon
Bradi2g58820 1.0kb upstream 1.0kb upstream 4767 true Bd2: 56407961-56412727 Brachypodium distachyon
Bradi2g58820 1.0kb upstream 1.0kb upstream 1000 false Bd2: 56411728-56412727 Brachypodium distachyon
Bradi2g58820 1.0kb downstream 1.0kb downstream 4767 true Bd2: 56406961-56411727 Brachypodium distachyon
Bradi2g58820 1.0kb downstream 1.0kb downstream 1000 false Bd2: 56406961-56407960 Brachypodium distachyon
Bradi2g58820 2.0kb upstream 2.0kb upstream 5767 true Bd2: 56407961-56413727 Brachypodium distachyon
Bradi2g58820 2.0kb upstream 2.0kb upstream 2000 false Bd2: 56411728-56413727 Brachypodium distachyon
Bradi2g58820 2.0kb downstream 2.0kb downstream 5767 true Bd2: 56405961-56411727 Brachypodium distachyon
Bradi2g58820 2.0kb downstream 2.0kb downstream 2000 false Bd2: 56405961-56407960 Brachypodium distachyon
Bradi2g58820 5.0kb upstream 5.0kb upstream 8767 true Bd2: 56407961-56416727 Brachypodium distachyon
Bradi2g58820 5.0kb upstream 5.0kb upstream 5000 false Bd2: 56411728-56416727 Brachypodium distachyon
Bradi2g58820 5.0kb downstream 5.0kb downstream 8767 true Bd2: 56402961-56411727 Brachypodium distachyon
Bradi2g58820 5.0kb downstream 5.0kb downstream 5000 false Bd2: 56402961-56407960 Brachypodium distachyon
Bradi2g58820 10.0kb upstream 10.0kb upstream 13767 true Bd2: 56407961-56421727 Brachypodium distachyon
Bradi2g58820 10.0kb upstream 10.0kb upstream 10000 false Bd2: 56411728-56421727 Brachypodium distachyon
Bradi2g58820 10.0kb downstream 10.0kb downstream 13767 true Bd2: 56397961-56411727 Brachypodium distachyon
Bradi2g58820 10.0kb downstream 10.0kb downstream 10000 false Bd2: 56397961-56407960 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574875 5269 Grass View MSA
122050817 5273 Angiosperm View MSA
121348278 5274 Embryophyte View MSA
123380804 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.487        
cufflinks 5.17        
cufflinks 5.352        
cufflinks 5.731        
cufflinks 3.345        
cufflinks 4.112        
cufflinks 4.109        
cufflinks 3.917        
cufflinks 4.833        
cufflinks 4.053        
cufflinks 1.185       Low
cufflinks 3.943        
cufflinks 1.633       Low
cufflinks 1.226       Low
cufflinks 3.521        
cufflinks 4.293        
cufflinks 5.143        
cufflinks 5.152        
cufflinks 4.985        
cufflinks 1.005       Low
cufflinks 5.154        
cufflinks 5.762        
cufflinks 3.886        
cufflinks 3.825        
cufflinks 4.698        
cufflinks 4.439        
cufflinks 1.533       Low
cufflinks 4.841        
cufflinks 5.499        
cufflinks 6.538       High

0 Strain