Gene : Bradi2g58770 B. distachyon v3.1
Defline:  (1 of 1) PTHR12506//PTHR12506:SF21 - PROTEIN PHOSPHATASE RELATED // SUBFAMILY NOT NAMED Genomic Order:  7101
Name:  ? Bradi2g58770 Secondary Identifier:  ? PAC:32779634
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g58770 0.5kb upstream 0.5kb upstream 5464 true Bd2: 56359643-56365106 Brachypodium distachyon
Bradi2g58770 0.5kb upstream 0.5kb upstream 500 false Bd2: 56364607-56365106 Brachypodium distachyon
Bradi2g58770 0.5kb downstream 0.5kb downstream 5464 true Bd2: 56359143-56364606 Brachypodium distachyon
Bradi2g58770 0.5kb downstream 0.5kb downstream 500 false Bd2: 56359143-56359642 Brachypodium distachyon
Bradi2g58770 1.0kb upstream 1.0kb upstream 5964 true Bd2: 56359643-56365606 Brachypodium distachyon
Bradi2g58770 1.0kb upstream 1.0kb upstream 1000 false Bd2: 56364607-56365606 Brachypodium distachyon
Bradi2g58770 1.0kb downstream 1.0kb downstream 5964 true Bd2: 56358643-56364606 Brachypodium distachyon
Bradi2g58770 1.0kb downstream 1.0kb downstream 1000 false Bd2: 56358643-56359642 Brachypodium distachyon
Bradi2g58770 2.0kb upstream 2.0kb upstream 6964 true Bd2: 56359643-56366606 Brachypodium distachyon
Bradi2g58770 2.0kb upstream 2.0kb upstream 2000 false Bd2: 56364607-56366606 Brachypodium distachyon
Bradi2g58770 2.0kb downstream 2.0kb downstream 6964 true Bd2: 56357643-56364606 Brachypodium distachyon
Bradi2g58770 2.0kb downstream 2.0kb downstream 2000 false Bd2: 56357643-56359642 Brachypodium distachyon
Bradi2g58770 5.0kb upstream 5.0kb upstream 9964 true Bd2: 56359643-56369606 Brachypodium distachyon
Bradi2g58770 5.0kb upstream 5.0kb upstream 5000 false Bd2: 56364607-56369606 Brachypodium distachyon
Bradi2g58770 5.0kb downstream 5.0kb downstream 9964 true Bd2: 56354643-56364606 Brachypodium distachyon
Bradi2g58770 5.0kb downstream 5.0kb downstream 5000 false Bd2: 56354643-56359642 Brachypodium distachyon
Bradi2g58770 10.0kb upstream 10.0kb upstream 14964 true Bd2: 56359643-56374606 Brachypodium distachyon
Bradi2g58770 10.0kb upstream 10.0kb upstream 10000 false Bd2: 56364607-56374606 Brachypodium distachyon
Bradi2g58770 10.0kb downstream 10.0kb downstream 14964 true Bd2: 56349643-56364606 Brachypodium distachyon
Bradi2g58770 10.0kb downstream 10.0kb downstream 10000 false Bd2: 56349643-56359642 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582306 5269 Grass View MSA
122047416 5273 Angiosperm View MSA
121348027 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.033     High  
cufflinks 40.298     High  
cufflinks 72.074     High High
cufflinks 46.555     High  
cufflinks 22.364     High  
cufflinks 24.416     High  
cufflinks 20.568     High  
cufflinks 41.335     High  
cufflinks 31.29     High  
cufflinks 44.261     High  
cufflinks 34.928     High  
cufflinks 40.853     High  
cufflinks 51.617     High  
cufflinks 43.892     High  
cufflinks 42.819     High  
cufflinks 37.86     High  
cufflinks 35.672     High  
cufflinks 7.238       Low
cufflinks 36.792     High  
cufflinks 4.199       Low
cufflinks 12.893     High Low
cufflinks 63.163     High High
cufflinks 35.516     High  
cufflinks 32.753     High  
cufflinks 20.751     High  
cufflinks 66.484     High High
cufflinks 37.224     High  
cufflinks 59.452     High High
cufflinks 62.633     High High
cufflinks 11.828     High Low

0 Strain