Gene : Bradi4g23450 B. distachyon v3.1
Defline:  (1 of 1) PTHR20275:SF6 - NADH KINASE POS5, MITOCHONDRIAL Genomic Order:  2971
Name:  ? Bradi4g23450 Secondary Identifier:  ? PAC:32786946
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5083 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g23450 0.5kb upstream 0.5kb upstream 6656 true Bd4: 28191609-28198264 Brachypodium distachyon
Bradi4g23450 0.5kb upstream 0.5kb upstream 500 false Bd4: 28191609-28192108 Brachypodium distachyon
Bradi4g23450 0.5kb downstream 0.5kb downstream 6656 true Bd4: 28192109-28198764 Brachypodium distachyon
Bradi4g23450 0.5kb downstream 0.5kb downstream 500 false Bd4: 28198265-28198764 Brachypodium distachyon
Bradi4g23450 1.0kb upstream 1.0kb upstream 7156 true Bd4: 28191109-28198264 Brachypodium distachyon
Bradi4g23450 1.0kb upstream 1.0kb upstream 1000 false Bd4: 28191109-28192108 Brachypodium distachyon
Bradi4g23450 1.0kb downstream 1.0kb downstream 7156 true Bd4: 28192109-28199264 Brachypodium distachyon
Bradi4g23450 1.0kb downstream 1.0kb downstream 1000 false Bd4: 28198265-28199264 Brachypodium distachyon
Bradi4g23450 2.0kb upstream 2.0kb upstream 8156 true Bd4: 28190109-28198264 Brachypodium distachyon
Bradi4g23450 2.0kb upstream 2.0kb upstream 2000 false Bd4: 28190109-28192108 Brachypodium distachyon
Bradi4g23450 2.0kb downstream 2.0kb downstream 8156 true Bd4: 28192109-28200264 Brachypodium distachyon
Bradi4g23450 2.0kb downstream 2.0kb downstream 2000 false Bd4: 28198265-28200264 Brachypodium distachyon
Bradi4g23450 5.0kb upstream 5.0kb upstream 11156 true Bd4: 28187109-28198264 Brachypodium distachyon
Bradi4g23450 5.0kb upstream 5.0kb upstream 5000 false Bd4: 28187109-28192108 Brachypodium distachyon
Bradi4g23450 5.0kb downstream 5.0kb downstream 11156 true Bd4: 28192109-28203264 Brachypodium distachyon
Bradi4g23450 5.0kb downstream 5.0kb downstream 5000 false Bd4: 28198265-28203264 Brachypodium distachyon
Bradi4g23450 10.0kb upstream 10.0kb upstream 16156 true Bd4: 28182109-28198264 Brachypodium distachyon
Bradi4g23450 10.0kb upstream 10.0kb upstream 10000 false Bd4: 28182109-28192108 Brachypodium distachyon
Bradi4g23450 10.0kb downstream 10.0kb downstream 16156 true Bd4: 28192109-28208264 Brachypodium distachyon
Bradi4g23450 10.0kb downstream 10.0kb downstream 10000 false Bd4: 28198265-28208264 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570524 5269 Grass View MSA
122042984 5273 Angiosperm View MSA
121349739 5274 Embryophyte View MSA
123425454 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.544        
cufflinks 19.738     High  
cufflinks 37.745     High High
cufflinks 16.903     High  
cufflinks 8.349        
cufflinks 23.897     High  
cufflinks 19.108     High  
cufflinks 23.521     High  
cufflinks 21.602     High  
cufflinks 14.047     High  
cufflinks 55.587     High High
cufflinks 29.644     High  
cufflinks 42.602     High High
cufflinks 45.927     High High
cufflinks 17.597     High  
cufflinks 24.335     High  
cufflinks 11.158     High  
cufflinks 2.959       Low
cufflinks 8.85        
cufflinks 6.77       Low
cufflinks 6.117       Low
cufflinks 27.491     High  
cufflinks 22.878     High  
cufflinks 18.128     High  
cufflinks 14.282     High  
cufflinks 29.318     High  
cufflinks 64.916     High High
cufflinks 30.552     High  
cufflinks 29.298     High  
cufflinks 6.845       Low

0 Strain