Gene : Bradi2g59260 B. distachyon v3.1
Defline:  (1 of 1) KOG3117 - Protein involved in rRNA processing Genomic Order:  7171
Name:  ? Bradi2g59260 Secondary Identifier:  ? PAC:32779129
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g59260 0.5kb upstream 0.5kb upstream 3546 true Bd2: 56811963-56815508 Brachypodium distachyon
Bradi2g59260 0.5kb upstream 0.5kb upstream 500 false Bd2: 56815009-56815508 Brachypodium distachyon
Bradi2g59260 0.5kb downstream 0.5kb downstream 3546 true Bd2: 56811463-56815008 Brachypodium distachyon
Bradi2g59260 0.5kb downstream 0.5kb downstream 500 false Bd2: 56811463-56811962 Brachypodium distachyon
Bradi2g59260 1.0kb upstream 1.0kb upstream 4046 true Bd2: 56811963-56816008 Brachypodium distachyon
Bradi2g59260 1.0kb upstream 1.0kb upstream 1000 false Bd2: 56815009-56816008 Brachypodium distachyon
Bradi2g59260 1.0kb downstream 1.0kb downstream 4046 true Bd2: 56810963-56815008 Brachypodium distachyon
Bradi2g59260 1.0kb downstream 1.0kb downstream 1000 false Bd2: 56810963-56811962 Brachypodium distachyon
Bradi2g59260 2.0kb upstream 2.0kb upstream 5046 true Bd2: 56811963-56817008 Brachypodium distachyon
Bradi2g59260 2.0kb upstream 2.0kb upstream 2000 false Bd2: 56815009-56817008 Brachypodium distachyon
Bradi2g59260 2.0kb downstream 2.0kb downstream 5046 true Bd2: 56809963-56815008 Brachypodium distachyon
Bradi2g59260 2.0kb downstream 2.0kb downstream 2000 false Bd2: 56809963-56811962 Brachypodium distachyon
Bradi2g59260 5.0kb upstream 5.0kb upstream 8046 true Bd2: 56811963-56820008 Brachypodium distachyon
Bradi2g59260 5.0kb upstream 5.0kb upstream 5000 false Bd2: 56815009-56820008 Brachypodium distachyon
Bradi2g59260 5.0kb downstream 5.0kb downstream 8046 true Bd2: 56806963-56815008 Brachypodium distachyon
Bradi2g59260 5.0kb downstream 5.0kb downstream 5000 false Bd2: 56806963-56811962 Brachypodium distachyon
Bradi2g59260 10.0kb upstream 10.0kb upstream 13046 true Bd2: 56811963-56825008 Brachypodium distachyon
Bradi2g59260 10.0kb upstream 10.0kb upstream 10000 false Bd2: 56815009-56825008 Brachypodium distachyon
Bradi2g59260 10.0kb downstream 10.0kb downstream 13046 true Bd2: 56801963-56815008 Brachypodium distachyon
Bradi2g59260 10.0kb downstream 10.0kb downstream 10000 false Bd2: 56801963-56811962 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569087 5269 Grass View MSA
122047581 5273 Angiosperm View MSA
121345702 5274 Embryophyte View MSA
123380258 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.308     High  
cufflinks 9.788        
cufflinks 8.235        
cufflinks 8.795        
cufflinks 3.776       Low
cufflinks 9.483     High  
cufflinks 9.127        
cufflinks 6.773        
cufflinks 7.785        
cufflinks 5.881        
cufflinks 4.738       Low
cufflinks 6.366        
cufflinks 2.854       Low
cufflinks 3.841       Low
cufflinks 4.646       Low
cufflinks 9.767     High  
cufflinks 8.616        
cufflinks 14.97     High High
cufflinks 9.704        
cufflinks 4.64       Low
cufflinks 9.626        
cufflinks 6.286        
cufflinks 5.87        
cufflinks 6.753        
cufflinks 9.971     High  
cufflinks 6.642        
cufflinks 4.243       Low
cufflinks 6.58        
cufflinks 6.214        
cufflinks 9.684        

0 Strain