Gene : Bradi2g59520 B. distachyon v3.1
Defline:  (1 of 1) K17560 - unconventional prefoldin RPB5 interactor 1 (URI1) Genomic Order:  7200
Name:  ? Bradi2g59520 Secondary Identifier:  ? PAC:32780468
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g59520 0.5kb upstream 0.5kb upstream 4508 true Bd2: 56997584-57002091 Brachypodium distachyon
Bradi2g59520 0.5kb upstream 0.5kb upstream 500 false Bd2: 56997584-56998083 Brachypodium distachyon
Bradi2g59520 0.5kb downstream 0.5kb downstream 4508 true Bd2: 56998084-57002591 Brachypodium distachyon
Bradi2g59520 0.5kb downstream 0.5kb downstream 500 false Bd2: 57002092-57002591 Brachypodium distachyon
Bradi2g59520 1.0kb upstream 1.0kb upstream 5008 true Bd2: 56997084-57002091 Brachypodium distachyon
Bradi2g59520 1.0kb upstream 1.0kb upstream 1000 false Bd2: 56997084-56998083 Brachypodium distachyon
Bradi2g59520 1.0kb downstream 1.0kb downstream 5008 true Bd2: 56998084-57003091 Brachypodium distachyon
Bradi2g59520 1.0kb downstream 1.0kb downstream 1000 false Bd2: 57002092-57003091 Brachypodium distachyon
Bradi2g59520 2.0kb upstream 2.0kb upstream 6008 true Bd2: 56996084-57002091 Brachypodium distachyon
Bradi2g59520 2.0kb upstream 2.0kb upstream 2000 false Bd2: 56996084-56998083 Brachypodium distachyon
Bradi2g59520 2.0kb downstream 2.0kb downstream 6008 true Bd2: 56998084-57004091 Brachypodium distachyon
Bradi2g59520 2.0kb downstream 2.0kb downstream 2000 false Bd2: 57002092-57004091 Brachypodium distachyon
Bradi2g59520 5.0kb upstream 5.0kb upstream 9008 true Bd2: 56993084-57002091 Brachypodium distachyon
Bradi2g59520 5.0kb upstream 5.0kb upstream 5000 false Bd2: 56993084-56998083 Brachypodium distachyon
Bradi2g59520 5.0kb downstream 5.0kb downstream 9008 true Bd2: 56998084-57007091 Brachypodium distachyon
Bradi2g59520 5.0kb downstream 5.0kb downstream 5000 false Bd2: 57002092-57007091 Brachypodium distachyon
Bradi2g59520 10.0kb upstream 10.0kb upstream 14008 true Bd2: 56988084-57002091 Brachypodium distachyon
Bradi2g59520 10.0kb upstream 10.0kb upstream 10000 false Bd2: 56988084-56998083 Brachypodium distachyon
Bradi2g59520 10.0kb downstream 10.0kb downstream 14008 true Bd2: 56998084-57012091 Brachypodium distachyon
Bradi2g59520 10.0kb downstream 10.0kb downstream 10000 false Bd2: 57002092-57012091 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041391 5273 Angiosperm View MSA
124588556 5269 Grass View MSA
121345968 5274 Embryophyte View MSA
123425658 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.904        
cufflinks 4.628        
cufflinks 6.052        
cufflinks 5.178        
cufflinks 6.311        
cufflinks 3.568        
cufflinks 4.028        
cufflinks 3.496        
cufflinks 3.502        
cufflinks 8.236       High
cufflinks 3.603        
cufflinks 3.224       Low
cufflinks 2.677       Low
cufflinks 2.938       Low
cufflinks 3.981        
cufflinks 3.625        
cufflinks 6.598        
cufflinks 5.592        
cufflinks 7.375       High
cufflinks 5.237        
cufflinks 5.026        
cufflinks 6.314        
cufflinks 3.853        
cufflinks 3.535        
cufflinks 4.543        
cufflinks 7.832       High
cufflinks 2.387       Low
cufflinks 7.574       High
cufflinks 6.16        
cufflinks 4.922        

0 Strain