Gene : Bradi2g60390 B. distachyon v3.1
Defline:  (1 of 1) PTHR11728:SF17 - 6-PHOSPHOGLUCONATE DEHYDROGENASE-LIKE PROTEIN Genomic Order:  7305
Name:  ? Bradi2g60390 Secondary Identifier:  ? PAC:32777459
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6118 Brachypodium distachyon pathologic  
Bdistachyon PWY-7411 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g60390 0.5kb upstream 0.5kb upstream 5429 true Bd2: 57529437-57534865 Brachypodium distachyon
Bradi2g60390 0.5kb upstream 0.5kb upstream 500 false Bd2: 57529437-57529936 Brachypodium distachyon
Bradi2g60390 0.5kb downstream 0.5kb downstream 5429 true Bd2: 57529937-57535365 Brachypodium distachyon
Bradi2g60390 0.5kb downstream 0.5kb downstream 500 false Bd2: 57534866-57535365 Brachypodium distachyon
Bradi2g60390 1.0kb upstream 1.0kb upstream 5929 true Bd2: 57528937-57534865 Brachypodium distachyon
Bradi2g60390 1.0kb upstream 1.0kb upstream 1000 false Bd2: 57528937-57529936 Brachypodium distachyon
Bradi2g60390 1.0kb downstream 1.0kb downstream 5929 true Bd2: 57529937-57535865 Brachypodium distachyon
Bradi2g60390 1.0kb downstream 1.0kb downstream 1000 false Bd2: 57534866-57535865 Brachypodium distachyon
Bradi2g60390 2.0kb upstream 2.0kb upstream 6929 true Bd2: 57527937-57534865 Brachypodium distachyon
Bradi2g60390 2.0kb upstream 2.0kb upstream 2000 false Bd2: 57527937-57529936 Brachypodium distachyon
Bradi2g60390 2.0kb downstream 2.0kb downstream 6929 true Bd2: 57529937-57536865 Brachypodium distachyon
Bradi2g60390 2.0kb downstream 2.0kb downstream 2000 false Bd2: 57534866-57536865 Brachypodium distachyon
Bradi2g60390 5.0kb upstream 5.0kb upstream 9929 true Bd2: 57524937-57534865 Brachypodium distachyon
Bradi2g60390 5.0kb upstream 5.0kb upstream 5000 false Bd2: 57524937-57529936 Brachypodium distachyon
Bradi2g60390 5.0kb downstream 5.0kb downstream 9929 true Bd2: 57529937-57539865 Brachypodium distachyon
Bradi2g60390 5.0kb downstream 5.0kb downstream 5000 false Bd2: 57534866-57539865 Brachypodium distachyon
Bradi2g60390 10.0kb upstream 10.0kb upstream 14929 true Bd2: 57519937-57534865 Brachypodium distachyon
Bradi2g60390 10.0kb upstream 10.0kb upstream 10000 false Bd2: 57519937-57529936 Brachypodium distachyon
Bradi2g60390 10.0kb downstream 10.0kb downstream 14929 true Bd2: 57529937-57544865 Brachypodium distachyon
Bradi2g60390 10.0kb downstream 10.0kb downstream 10000 false Bd2: 57534866-57544865 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574731 5269 Grass View MSA
122046820 5273 Angiosperm View MSA
121349677 5274 Embryophyte View MSA
123381397 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.533        
cufflinks 2.532        
cufflinks 3.335        
cufflinks 2.239        
cufflinks 1.786        
cufflinks 2.113        
cufflinks 2.27        
cufflinks 1.728        
cufflinks 1.838        
cufflinks 2.479        
cufflinks 0.146       Low
cufflinks 2.791        
cufflinks 0.101       Low
cufflinks 0.086       Low
cufflinks 1.599        
cufflinks 2.227        
cufflinks 1.885        
cufflinks 0.948        
cufflinks 2.216        
cufflinks 0.522        
cufflinks 1.089        
cufflinks 3.174        
cufflinks 1.882        
cufflinks 2.07        
cufflinks 1.88        
cufflinks 3.335        
cufflinks 0.085     Low Low
cufflinks 2.576        
cufflinks 3.064        
cufflinks 4.857       High

0 Strain