Gene : Bradi4g24700 B. distachyon v3.1
Defline:  (1 of 1) PTHR14379//PTHR14379:SF8 - LIMKAIN B LKAP Genomic Order:  3152
Name:  ? Bradi4g24700 Secondary Identifier:  ? PAC:32785689
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g24700 0.5kb upstream 0.5kb upstream 4922 true Bd4: 29817420-29822341 Brachypodium distachyon
Bradi4g24700 0.5kb upstream 0.5kb upstream 500 false Bd4: 29821842-29822341 Brachypodium distachyon
Bradi4g24700 0.5kb downstream 0.5kb downstream 4922 true Bd4: 29816920-29821841 Brachypodium distachyon
Bradi4g24700 0.5kb downstream 0.5kb downstream 500 false Bd4: 29816920-29817419 Brachypodium distachyon
Bradi4g24700 1.0kb upstream 1.0kb upstream 5422 true Bd4: 29817420-29822841 Brachypodium distachyon
Bradi4g24700 1.0kb upstream 1.0kb upstream 1000 false Bd4: 29821842-29822841 Brachypodium distachyon
Bradi4g24700 1.0kb downstream 1.0kb downstream 5422 true Bd4: 29816420-29821841 Brachypodium distachyon
Bradi4g24700 1.0kb downstream 1.0kb downstream 1000 false Bd4: 29816420-29817419 Brachypodium distachyon
Bradi4g24700 2.0kb upstream 2.0kb upstream 6422 true Bd4: 29817420-29823841 Brachypodium distachyon
Bradi4g24700 2.0kb upstream 2.0kb upstream 2000 false Bd4: 29821842-29823841 Brachypodium distachyon
Bradi4g24700 2.0kb downstream 2.0kb downstream 6422 true Bd4: 29815420-29821841 Brachypodium distachyon
Bradi4g24700 2.0kb downstream 2.0kb downstream 2000 false Bd4: 29815420-29817419 Brachypodium distachyon
Bradi4g24700 5.0kb upstream 5.0kb upstream 9422 true Bd4: 29817420-29826841 Brachypodium distachyon
Bradi4g24700 5.0kb upstream 5.0kb upstream 5000 false Bd4: 29821842-29826841 Brachypodium distachyon
Bradi4g24700 5.0kb downstream 5.0kb downstream 9422 true Bd4: 29812420-29821841 Brachypodium distachyon
Bradi4g24700 5.0kb downstream 5.0kb downstream 5000 false Bd4: 29812420-29817419 Brachypodium distachyon
Bradi4g24700 10.0kb upstream 10.0kb upstream 14422 true Bd4: 29817420-29831841 Brachypodium distachyon
Bradi4g24700 10.0kb upstream 10.0kb upstream 10000 false Bd4: 29821842-29831841 Brachypodium distachyon
Bradi4g24700 10.0kb downstream 10.0kb downstream 14422 true Bd4: 29807420-29821841 Brachypodium distachyon
Bradi4g24700 10.0kb downstream 10.0kb downstream 10000 false Bd4: 29807420-29817419 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568013 5269 Grass View MSA
122049513 5273 Angiosperm View MSA
121311448 5274 Embryophyte View MSA
123348743 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.036     Low Low
cufflinks 0.222       High
cufflinks 0.111        
cufflinks 0.15        
cufflinks 0.036     Low Low
cufflinks 0.156        
cufflinks 0.168        
cufflinks 0.13        
cufflinks 0.131        
cufflinks 0.055     Low  
cufflinks 0.055     Low  
cufflinks 0.108        
cufflinks 0.025     Low Low
cufflinks 0.03     Low Low
cufflinks 0.021     Low Low
cufflinks 0.144        
cufflinks 0.076     Low  
cufflinks 0.295       High
cufflinks 0.131     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.174        
cufflinks 0.147        
cufflinks 0.127        
cufflinks 0.112        
cufflinks 0.174        
cufflinks 0.093     Low  
cufflinks 0.049     Low  
cufflinks 0.079     Low  
cufflinks 0.099     Low  
cufflinks 0.195        

0 Strain