Gene : Bradi2g60570 B. distachyon v3.1
Defline:  (1 of 2) PTHR22942:SF41 - DNA REPAIR PROTEIN RECA HOMOLOG 2, MITOCHONDRIAL Genomic Order:  7345
Name:  ? Bradi2g60570 Secondary Identifier:  ? PAC:32782021
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g60570 0.5kb upstream 0.5kb upstream 3084 true Bd2: 57716169-57719252 Brachypodium distachyon
Bradi2g60570 0.5kb upstream 0.5kb upstream 500 false Bd2: 57718753-57719252 Brachypodium distachyon
Bradi2g60570 0.5kb downstream 0.5kb downstream 3084 true Bd2: 57715669-57718752 Brachypodium distachyon
Bradi2g60570 0.5kb downstream 0.5kb downstream 500 false Bd2: 57715669-57716168 Brachypodium distachyon
Bradi2g60570 1.0kb upstream 1.0kb upstream 3584 true Bd2: 57716169-57719752 Brachypodium distachyon
Bradi2g60570 1.0kb upstream 1.0kb upstream 1000 false Bd2: 57718753-57719752 Brachypodium distachyon
Bradi2g60570 1.0kb downstream 1.0kb downstream 3584 true Bd2: 57715169-57718752 Brachypodium distachyon
Bradi2g60570 1.0kb downstream 1.0kb downstream 1000 false Bd2: 57715169-57716168 Brachypodium distachyon
Bradi2g60570 2.0kb upstream 2.0kb upstream 4584 true Bd2: 57716169-57720752 Brachypodium distachyon
Bradi2g60570 2.0kb upstream 2.0kb upstream 2000 false Bd2: 57718753-57720752 Brachypodium distachyon
Bradi2g60570 2.0kb downstream 2.0kb downstream 4584 true Bd2: 57714169-57718752 Brachypodium distachyon
Bradi2g60570 2.0kb downstream 2.0kb downstream 2000 false Bd2: 57714169-57716168 Brachypodium distachyon
Bradi2g60570 5.0kb upstream 5.0kb upstream 7584 true Bd2: 57716169-57723752 Brachypodium distachyon
Bradi2g60570 5.0kb upstream 5.0kb upstream 5000 false Bd2: 57718753-57723752 Brachypodium distachyon
Bradi2g60570 5.0kb downstream 5.0kb downstream 7584 true Bd2: 57711169-57718752 Brachypodium distachyon
Bradi2g60570 5.0kb downstream 5.0kb downstream 5000 false Bd2: 57711169-57716168 Brachypodium distachyon
Bradi2g60570 10.0kb upstream 10.0kb upstream 12584 true Bd2: 57716169-57728752 Brachypodium distachyon
Bradi2g60570 10.0kb upstream 10.0kb upstream 10000 false Bd2: 57718753-57728752 Brachypodium distachyon
Bradi2g60570 10.0kb downstream 10.0kb downstream 12584 true Bd2: 57706169-57718752 Brachypodium distachyon
Bradi2g60570 10.0kb downstream 10.0kb downstream 10000 false Bd2: 57706169-57716168 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030734 5273 Angiosperm View MSA
124546435 5269 Grass View MSA
121351318 5274 Embryophyte View MSA
123382118 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.106        
cufflinks 0.156        
cufflinks 0.139        
cufflinks 0.124        
cufflinks 0.137        
cufflinks 0.157        
cufflinks 0.13        
cufflinks 0.146        
cufflinks 0.068     Low Low
cufflinks 0.09     Low  
cufflinks 0.098        
cufflinks 0.159        
cufflinks 0.111        
cufflinks 0.077       Low
cufflinks 0.137        
cufflinks 0.098        
cufflinks 0.05     Low Low
cufflinks 0.17        
cufflinks 0.154     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.189        
cufflinks 0.141        
cufflinks 0.145        
cufflinks 0.101     Low  
cufflinks 0.16        
cufflinks 0.17        
cufflinks 0.104        
cufflinks 0.058     Low Low
cufflinks 0.108     Low  
cufflinks 0.262       High

0 Strain