Gene : Bradi2g60730 B. distachyon v3.1
Defline:  (1 of 1) 1.5.1.2 - Pyrroline-5-carboxylate reductase / P5CR Genomic Order:  7364
Name:  ? Bradi2g60730 Secondary Identifier:  ? PAC:32775909
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon ARG-PRO-PWY Brachypodium distachyon pathologic  
Bdistachyon PROSYN-PWY Brachypodium distachyon pathologic  
Bdistachyon PWY-3341 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g60730 0.5kb upstream 0.5kb upstream 3371 true Bd2: 57816861-57820231 Brachypodium distachyon
Bradi2g60730 0.5kb upstream 0.5kb upstream 500 false Bd2: 57816861-57817360 Brachypodium distachyon
Bradi2g60730 0.5kb downstream 0.5kb downstream 3371 true Bd2: 57817361-57820731 Brachypodium distachyon
Bradi2g60730 0.5kb downstream 0.5kb downstream 500 false Bd2: 57820232-57820731 Brachypodium distachyon
Bradi2g60730 1.0kb upstream 1.0kb upstream 3871 true Bd2: 57816361-57820231 Brachypodium distachyon
Bradi2g60730 1.0kb upstream 1.0kb upstream 1000 false Bd2: 57816361-57817360 Brachypodium distachyon
Bradi2g60730 1.0kb downstream 1.0kb downstream 3871 true Bd2: 57817361-57821231 Brachypodium distachyon
Bradi2g60730 1.0kb downstream 1.0kb downstream 1000 false Bd2: 57820232-57821231 Brachypodium distachyon
Bradi2g60730 2.0kb upstream 2.0kb upstream 4871 true Bd2: 57815361-57820231 Brachypodium distachyon
Bradi2g60730 2.0kb upstream 2.0kb upstream 2000 false Bd2: 57815361-57817360 Brachypodium distachyon
Bradi2g60730 2.0kb downstream 2.0kb downstream 4871 true Bd2: 57817361-57822231 Brachypodium distachyon
Bradi2g60730 2.0kb downstream 2.0kb downstream 2000 false Bd2: 57820232-57822231 Brachypodium distachyon
Bradi2g60730 5.0kb upstream 5.0kb upstream 7871 true Bd2: 57812361-57820231 Brachypodium distachyon
Bradi2g60730 5.0kb upstream 5.0kb upstream 5000 false Bd2: 57812361-57817360 Brachypodium distachyon
Bradi2g60730 5.0kb downstream 5.0kb downstream 7871 true Bd2: 57817361-57825231 Brachypodium distachyon
Bradi2g60730 5.0kb downstream 5.0kb downstream 5000 false Bd2: 57820232-57825231 Brachypodium distachyon
Bradi2g60730 10.0kb upstream 10.0kb upstream 12871 true Bd2: 57807361-57820231 Brachypodium distachyon
Bradi2g60730 10.0kb upstream 10.0kb upstream 10000 false Bd2: 57807361-57817360 Brachypodium distachyon
Bradi2g60730 10.0kb downstream 10.0kb downstream 12871 true Bd2: 57817361-57830231 Brachypodium distachyon
Bradi2g60730 10.0kb downstream 10.0kb downstream 10000 false Bd2: 57820232-57830231 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579215 5269 Grass View MSA
122043656 5273 Angiosperm View MSA
123428906 5275 Viridiplantae View MSA
121346927 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.426        
cufflinks 7.751        
cufflinks 7.643        
cufflinks 8.725        
cufflinks 12.598     High  
cufflinks 5.383        
cufflinks 6.326        
cufflinks 5.704        
cufflinks 5.038        
cufflinks 7.624        
cufflinks 2.973       Low
cufflinks 4.771        
cufflinks 2.393       Low
cufflinks 2.925       Low
cufflinks 4.893        
cufflinks 7.105        
cufflinks 11.438     High  
cufflinks 12.756     High  
cufflinks 35.403     High High
cufflinks 36.573     High High
cufflinks 12.68     High  
cufflinks 6.491        
cufflinks 5.929        
cufflinks 5.145        
cufflinks 6.084        
cufflinks 10.102        
cufflinks 2.508       Low
cufflinks 8.556        
cufflinks 7.545        
cufflinks 9.555        

0 Strain