Gene : Bradi2g60990 B. distachyon v3.1
Defline:  (1 of 2) PTHR23423//PTHR23423:SF15 - ORGANIC SOLUTE TRANSPORTER-RELATED Genomic Order:  7396
Name:  ? Bradi2g60990 Secondary Identifier:  ? PAC:32781884
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g60990 0.5kb upstream 0.5kb upstream 5501 true Bd2: 57994925-58000425 Brachypodium distachyon
Bradi2g60990 0.5kb upstream 0.5kb upstream 500 false Bd2: 57994925-57995424 Brachypodium distachyon
Bradi2g60990 0.5kb downstream 0.5kb downstream 5501 true Bd2: 57995425-58000925 Brachypodium distachyon
Bradi2g60990 0.5kb downstream 0.5kb downstream 500 false Bd2: 58000426-58000925 Brachypodium distachyon
Bradi2g60990 1.0kb upstream 1.0kb upstream 6001 true Bd2: 57994425-58000425 Brachypodium distachyon
Bradi2g60990 1.0kb upstream 1.0kb upstream 1000 false Bd2: 57994425-57995424 Brachypodium distachyon
Bradi2g60990 1.0kb downstream 1.0kb downstream 6001 true Bd2: 57995425-58001425 Brachypodium distachyon
Bradi2g60990 1.0kb downstream 1.0kb downstream 1000 false Bd2: 58000426-58001425 Brachypodium distachyon
Bradi2g60990 2.0kb upstream 2.0kb upstream 7001 true Bd2: 57993425-58000425 Brachypodium distachyon
Bradi2g60990 2.0kb upstream 2.0kb upstream 2000 false Bd2: 57993425-57995424 Brachypodium distachyon
Bradi2g60990 2.0kb downstream 2.0kb downstream 7001 true Bd2: 57995425-58002425 Brachypodium distachyon
Bradi2g60990 2.0kb downstream 2.0kb downstream 2000 false Bd2: 58000426-58002425 Brachypodium distachyon
Bradi2g60990 5.0kb upstream 5.0kb upstream 10001 true Bd2: 57990425-58000425 Brachypodium distachyon
Bradi2g60990 5.0kb upstream 5.0kb upstream 5000 false Bd2: 57990425-57995424 Brachypodium distachyon
Bradi2g60990 5.0kb downstream 5.0kb downstream 10001 true Bd2: 57995425-58005425 Brachypodium distachyon
Bradi2g60990 5.0kb downstream 5.0kb downstream 5000 false Bd2: 58000426-58005425 Brachypodium distachyon
Bradi2g60990 10.0kb upstream 10.0kb upstream 15001 true Bd2: 57985425-58000425 Brachypodium distachyon
Bradi2g60990 10.0kb upstream 10.0kb upstream 10000 false Bd2: 57985425-57995424 Brachypodium distachyon
Bradi2g60990 10.0kb downstream 10.0kb downstream 15001 true Bd2: 57995425-58010425 Brachypodium distachyon
Bradi2g60990 10.0kb downstream 10.0kb downstream 10000 false Bd2: 58000426-58010425 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571587 5269 Grass View MSA
122044930 5273 Angiosperm View MSA
121344114 5274 Embryophyte View MSA
123379976 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.963     High High
cufflinks 13.098     High  
cufflinks 10.017        
cufflinks 11.259     High  
cufflinks 36.057     High High
cufflinks 13.543     High  
cufflinks 13.37     High  
cufflinks 12.305     High  
cufflinks 12.258     High  
cufflinks 6.398       Low
cufflinks 10.78     High  
cufflinks 15.623     High  
cufflinks 10.234     High  
cufflinks 9.236     High  
cufflinks 16.325     High  
cufflinks 12.915     High  
cufflinks 11.244     High  
cufflinks 17.203     High  
cufflinks 26.456     High High
cufflinks 36.008     High High
cufflinks 13.294     High  
cufflinks 8.771       Low
cufflinks 12.847     High  
cufflinks 13.322     High  
cufflinks 12.57     High  
cufflinks 9.335        
cufflinks 9.872     High  
cufflinks 8.458       Low
cufflinks 8.599       Low
cufflinks 16.849     High  

0 Strain