Gene : Bradi4g45190 B. distachyon v3.1
Defline:  (1 of 1) PTHR24089//PTHR24089:SF300 - FAMILY NOT NAMED // MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN C Genomic Order:  5825
Name:  ? Bradi4g45190 Secondary Identifier:  ? PAC:32790426
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g45190 0.5kb upstream 0.5kb upstream 5201 true Bd4: 48288108-48293308 Brachypodium distachyon
Bradi4g45190 0.5kb upstream 0.5kb upstream 500 false Bd4: 48288108-48288607 Brachypodium distachyon
Bradi4g45190 0.5kb downstream 0.5kb downstream 5201 true Bd4: 48288608-48293808 Brachypodium distachyon
Bradi4g45190 0.5kb downstream 0.5kb downstream 500 false Bd4: 48293309-48293808 Brachypodium distachyon
Bradi4g45190 1.0kb upstream 1.0kb upstream 5701 true Bd4: 48287608-48293308 Brachypodium distachyon
Bradi4g45190 1.0kb upstream 1.0kb upstream 1000 false Bd4: 48287608-48288607 Brachypodium distachyon
Bradi4g45190 1.0kb downstream 1.0kb downstream 5701 true Bd4: 48288608-48294308 Brachypodium distachyon
Bradi4g45190 1.0kb downstream 1.0kb downstream 1000 false Bd4: 48293309-48294308 Brachypodium distachyon
Bradi4g45190 2.0kb upstream 2.0kb upstream 6701 true Bd4: 48286608-48293308 Brachypodium distachyon
Bradi4g45190 2.0kb upstream 2.0kb upstream 2000 false Bd4: 48286608-48288607 Brachypodium distachyon
Bradi4g45190 2.0kb downstream 2.0kb downstream 6701 true Bd4: 48288608-48295308 Brachypodium distachyon
Bradi4g45190 2.0kb downstream 2.0kb downstream 2000 false Bd4: 48293309-48295308 Brachypodium distachyon
Bradi4g45190 5.0kb upstream 5.0kb upstream 9701 true Bd4: 48283608-48293308 Brachypodium distachyon
Bradi4g45190 5.0kb upstream 5.0kb upstream 5000 false Bd4: 48283608-48288607 Brachypodium distachyon
Bradi4g45190 5.0kb downstream 5.0kb downstream 9701 true Bd4: 48288608-48298308 Brachypodium distachyon
Bradi4g45190 5.0kb downstream 5.0kb downstream 5000 false Bd4: 48293309-48298308 Brachypodium distachyon
Bradi4g45190 10.0kb upstream 10.0kb upstream 14701 true Bd4: 48278608-48293308 Brachypodium distachyon
Bradi4g45190 10.0kb upstream 10.0kb upstream 10000 false Bd4: 48278608-48288607 Brachypodium distachyon
Bradi4g45190 10.0kb downstream 10.0kb downstream 14701 true Bd4: 48288608-48303308 Brachypodium distachyon
Bradi4g45190 10.0kb downstream 10.0kb downstream 10000 false Bd4: 48293309-48303308 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124590518 5269 Grass View MSA
122046153 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121348054 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.591        
cufflinks 6.433        
cufflinks 11.56     High  
cufflinks 5.513       Low
cufflinks 6.208        
cufflinks 9.216        
cufflinks 7.669        
cufflinks 13.444     High  
cufflinks 11.039     High  
cufflinks 15.524     High High
cufflinks 21.319     High High
cufflinks 11.783     High  
cufflinks 17.222     High High
cufflinks 18.046     High High
cufflinks 9.747     High  
cufflinks 12.893     High  
cufflinks 7.738        
cufflinks 6.296        
cufflinks 6.719        
cufflinks 8.238        
cufflinks 4.213       Low
cufflinks 20.365     High High
cufflinks 12.346     High  
cufflinks 9.618     High  
cufflinks 7.72        
cufflinks 12.285     High  
cufflinks 16.572     High High
cufflinks 13.261     High  
cufflinks 14.517     High High
cufflinks 5.551       Low

0 Strain