Gene : Bradi3g03290 B. distachyon v3.1
Defline:  (1 of 7) PF10358 - N-terminal C2 in EEIG1 and EHBP1 proteins (NT-C2) Genomic Order:  380
Name:  ? Bradi3g03290 Secondary Identifier:  ? PAC:32822022
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g03290 0.5kb upstream 0.5kb upstream 11951 true Bd3: 2130111-2142061 Brachypodium distachyon
Bradi3g03290 0.5kb upstream 0.5kb upstream 500 false Bd3: 2141562-2142061 Brachypodium distachyon
Bradi3g03290 0.5kb downstream 0.5kb downstream 11951 true Bd3: 2129611-2141561 Brachypodium distachyon
Bradi3g03290 0.5kb downstream 0.5kb downstream 500 false Bd3: 2129611-2130110 Brachypodium distachyon
Bradi3g03290 1.0kb upstream 1.0kb upstream 12451 true Bd3: 2130111-2142561 Brachypodium distachyon
Bradi3g03290 1.0kb upstream 1.0kb upstream 1000 false Bd3: 2141562-2142561 Brachypodium distachyon
Bradi3g03290 1.0kb downstream 1.0kb downstream 12451 true Bd3: 2129111-2141561 Brachypodium distachyon
Bradi3g03290 1.0kb downstream 1.0kb downstream 1000 false Bd3: 2129111-2130110 Brachypodium distachyon
Bradi3g03290 2.0kb upstream 2.0kb upstream 13451 true Bd3: 2130111-2143561 Brachypodium distachyon
Bradi3g03290 2.0kb upstream 2.0kb upstream 2000 false Bd3: 2141562-2143561 Brachypodium distachyon
Bradi3g03290 2.0kb downstream 2.0kb downstream 13451 true Bd3: 2128111-2141561 Brachypodium distachyon
Bradi3g03290 2.0kb downstream 2.0kb downstream 2000 false Bd3: 2128111-2130110 Brachypodium distachyon
Bradi3g03290 5.0kb upstream 5.0kb upstream 16451 true Bd3: 2130111-2146561 Brachypodium distachyon
Bradi3g03290 5.0kb upstream 5.0kb upstream 5000 false Bd3: 2141562-2146561 Brachypodium distachyon
Bradi3g03290 5.0kb downstream 5.0kb downstream 16451 true Bd3: 2125111-2141561 Brachypodium distachyon
Bradi3g03290 5.0kb downstream 5.0kb downstream 5000 false Bd3: 2125111-2130110 Brachypodium distachyon
Bradi3g03290 10.0kb upstream 10.0kb upstream 21451 true Bd3: 2130111-2151561 Brachypodium distachyon
Bradi3g03290 10.0kb upstream 10.0kb upstream 10000 false Bd3: 2141562-2151561 Brachypodium distachyon
Bradi3g03290 10.0kb downstream 10.0kb downstream 21451 true Bd3: 2120111-2141561 Brachypodium distachyon
Bradi3g03290 10.0kb downstream 10.0kb downstream 10000 false Bd3: 2120111-2130110 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582435 5269 Grass View MSA
122048313 5273 Angiosperm View MSA
121348283 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.155        
cufflinks 2.763        
cufflinks 2.819        
cufflinks 2.034        
cufflinks 0.651        
cufflinks 2.264        
cufflinks 2.034        
cufflinks 1.696        
cufflinks 2.184        
cufflinks 1.109        
cufflinks 0.696        
cufflinks 2.626        
cufflinks 0.641        
cufflinks 0.491       Low
cufflinks 0.892        
cufflinks 2.199        
cufflinks 1.087        
cufflinks 4.107       High
cufflinks 1.376        
cufflinks 0.11     Low Low
cufflinks 2.775        
cufflinks 2.395        
cufflinks 1.862        
cufflinks 2.082        
cufflinks 1.881        
cufflinks 2.328        
cufflinks 0.595       Low
cufflinks 1.824        
cufflinks 2.046        
cufflinks 4.49       High

0 Strain