Gene : Bradi3g03637 B. distachyon v3.1
Defline:  (1 of 1) PTHR21286 - NUCLEAR PORE COMPLEX PROTEIN NUP160 Genomic Order:  428
Name:  ? Bradi3g03637 Secondary Identifier:  ? PAC:32823436
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g03637 0.5kb upstream 0.5kb upstream 14607 true Bd3: 2424376-2438982 Brachypodium distachyon
Bradi3g03637 0.5kb upstream 0.5kb upstream 500 false Bd3: 2424376-2424875 Brachypodium distachyon
Bradi3g03637 0.5kb downstream 0.5kb downstream 14607 true Bd3: 2424876-2439482 Brachypodium distachyon
Bradi3g03637 0.5kb downstream 0.5kb downstream 500 false Bd3: 2438983-2439482 Brachypodium distachyon
Bradi3g03637 1.0kb upstream 1.0kb upstream 15107 true Bd3: 2423876-2438982 Brachypodium distachyon
Bradi3g03637 1.0kb upstream 1.0kb upstream 1000 false Bd3: 2423876-2424875 Brachypodium distachyon
Bradi3g03637 1.0kb downstream 1.0kb downstream 15107 true Bd3: 2424876-2439982 Brachypodium distachyon
Bradi3g03637 1.0kb downstream 1.0kb downstream 1000 false Bd3: 2438983-2439982 Brachypodium distachyon
Bradi3g03637 2.0kb upstream 2.0kb upstream 16107 true Bd3: 2422876-2438982 Brachypodium distachyon
Bradi3g03637 2.0kb upstream 2.0kb upstream 2000 false Bd3: 2422876-2424875 Brachypodium distachyon
Bradi3g03637 2.0kb downstream 2.0kb downstream 16107 true Bd3: 2424876-2440982 Brachypodium distachyon
Bradi3g03637 2.0kb downstream 2.0kb downstream 2000 false Bd3: 2438983-2440982 Brachypodium distachyon
Bradi3g03637 5.0kb upstream 5.0kb upstream 19107 true Bd3: 2419876-2438982 Brachypodium distachyon
Bradi3g03637 5.0kb upstream 5.0kb upstream 5000 false Bd3: 2419876-2424875 Brachypodium distachyon
Bradi3g03637 5.0kb downstream 5.0kb downstream 19107 true Bd3: 2424876-2443982 Brachypodium distachyon
Bradi3g03637 5.0kb downstream 5.0kb downstream 5000 false Bd3: 2438983-2443982 Brachypodium distachyon
Bradi3g03637 10.0kb upstream 10.0kb upstream 24107 true Bd3: 2414876-2438982 Brachypodium distachyon
Bradi3g03637 10.0kb upstream 10.0kb upstream 10000 false Bd3: 2414876-2424875 Brachypodium distachyon
Bradi3g03637 10.0kb downstream 10.0kb downstream 24107 true Bd3: 2424876-2448982 Brachypodium distachyon
Bradi3g03637 10.0kb downstream 10.0kb downstream 10000 false Bd3: 2438983-2448982 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573309 5269 Grass View MSA
122043780 5273 Angiosperm View MSA
121346160 5274 Embryophyte View MSA
123425689 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.603        
cufflinks 4.216       High
cufflinks 3.407        
cufflinks 2.952        
cufflinks 0.583       Low
cufflinks 3.373        
cufflinks 3.181        
cufflinks 2.15        
cufflinks 3.051        
cufflinks 1.199        
cufflinks 1.402        
cufflinks 2.7        
cufflinks 0.755        
cufflinks 0.885        
cufflinks 0.604       Low
cufflinks 3.26        
cufflinks 1.052        
cufflinks 5.035       High
cufflinks 1.629        
cufflinks 0.445       Low
cufflinks 1.492        
cufflinks 2.694        
cufflinks 2.071        
cufflinks 2.259        
cufflinks 2.445        
cufflinks 2.294        
cufflinks 0.817        
cufflinks 1.804        
cufflinks 1.975        
cufflinks 3.328        

0 Strain