Gene : Bradi3g03941 B. distachyon v3.1
Defline:  (1 of 2) PTHR33391:SF5 - PHOTOSYSTEM II REACTION CENTER PROTEIN L Genomic Order:  472
Name:  ? Bradi3g03941 Secondary Identifier:  ? PAC:32820761
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g03941 0.5kb upstream 0.5kb upstream 617 true Bd3: 2687805-2688421 Brachypodium distachyon
Bradi3g03941 0.5kb upstream 0.5kb upstream 500 false Bd3: 2687922-2688421 Brachypodium distachyon
Bradi3g03941 0.5kb downstream 0.5kb downstream 617 true Bd3: 2687305-2687921 Brachypodium distachyon
Bradi3g03941 0.5kb downstream 0.5kb downstream 500 false Bd3: 2687305-2687804 Brachypodium distachyon
Bradi3g03941 1.0kb upstream 1.0kb upstream 1117 true Bd3: 2687805-2688921 Brachypodium distachyon
Bradi3g03941 1.0kb upstream 1.0kb upstream 1000 false Bd3: 2687922-2688921 Brachypodium distachyon
Bradi3g03941 1.0kb downstream 1.0kb downstream 1117 true Bd3: 2686805-2687921 Brachypodium distachyon
Bradi3g03941 1.0kb downstream 1.0kb downstream 1000 false Bd3: 2686805-2687804 Brachypodium distachyon
Bradi3g03941 2.0kb upstream 2.0kb upstream 2117 true Bd3: 2687805-2689921 Brachypodium distachyon
Bradi3g03941 2.0kb upstream 2.0kb upstream 2000 false Bd3: 2687922-2689921 Brachypodium distachyon
Bradi3g03941 2.0kb downstream 2.0kb downstream 2117 true Bd3: 2685805-2687921 Brachypodium distachyon
Bradi3g03941 2.0kb downstream 2.0kb downstream 2000 false Bd3: 2685805-2687804 Brachypodium distachyon
Bradi3g03941 5.0kb upstream 5.0kb upstream 5117 true Bd3: 2687805-2692921 Brachypodium distachyon
Bradi3g03941 5.0kb upstream 5.0kb upstream 5000 false Bd3: 2687922-2692921 Brachypodium distachyon
Bradi3g03941 5.0kb downstream 5.0kb downstream 5117 true Bd3: 2682805-2687921 Brachypodium distachyon
Bradi3g03941 5.0kb downstream 5.0kb downstream 5000 false Bd3: 2682805-2687804 Brachypodium distachyon
Bradi3g03941 10.0kb upstream 10.0kb upstream 10117 true Bd3: 2687805-2697921 Brachypodium distachyon
Bradi3g03941 10.0kb upstream 10.0kb upstream 10000 false Bd3: 2687922-2697921 Brachypodium distachyon
Bradi3g03941 10.0kb downstream 10.0kb downstream 10117 true Bd3: 2677805-2687921 Brachypodium distachyon
Bradi3g03941 10.0kb downstream 10.0kb downstream 10000 false Bd3: 2677805-2687804 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029204 5273 Angiosperm View MSA
124587530 5269 Grass View MSA
121348687 5274 Embryophyte View MSA
123380973 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain