Gene : Bradi3g04387 B. distachyon v3.1
Defline:  (1 of 1) PTHR23115:SF189 - TRANSLATION FACTOR GUF1 HOMOLOG, CHLOROPLASTIC Genomic Order:  536
Name:  ? Bradi3g04387 Secondary Identifier:  ? PAC:32815127
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g04387 0.5kb upstream 0.5kb upstream 9748 true Bd3: 3001373-3011120 Brachypodium distachyon
Bradi3g04387 0.5kb upstream 0.5kb upstream 500 false Bd3: 3010621-3011120 Brachypodium distachyon
Bradi3g04387 0.5kb downstream 0.5kb downstream 9748 true Bd3: 3000873-3010620 Brachypodium distachyon
Bradi3g04387 0.5kb downstream 0.5kb downstream 500 false Bd3: 3000873-3001372 Brachypodium distachyon
Bradi3g04387 1.0kb upstream 1.0kb upstream 10248 true Bd3: 3001373-3011620 Brachypodium distachyon
Bradi3g04387 1.0kb upstream 1.0kb upstream 1000 false Bd3: 3010621-3011620 Brachypodium distachyon
Bradi3g04387 1.0kb downstream 1.0kb downstream 10248 true Bd3: 3000373-3010620 Brachypodium distachyon
Bradi3g04387 1.0kb downstream 1.0kb downstream 1000 false Bd3: 3000373-3001372 Brachypodium distachyon
Bradi3g04387 2.0kb upstream 2.0kb upstream 11248 true Bd3: 3001373-3012620 Brachypodium distachyon
Bradi3g04387 2.0kb upstream 2.0kb upstream 2000 false Bd3: 3010621-3012620 Brachypodium distachyon
Bradi3g04387 2.0kb downstream 2.0kb downstream 11248 true Bd3: 2999373-3010620 Brachypodium distachyon
Bradi3g04387 2.0kb downstream 2.0kb downstream 2000 false Bd3: 2999373-3001372 Brachypodium distachyon
Bradi3g04387 5.0kb upstream 5.0kb upstream 14248 true Bd3: 3001373-3015620 Brachypodium distachyon
Bradi3g04387 5.0kb upstream 5.0kb upstream 5000 false Bd3: 3010621-3015620 Brachypodium distachyon
Bradi3g04387 5.0kb downstream 5.0kb downstream 14248 true Bd3: 2996373-3010620 Brachypodium distachyon
Bradi3g04387 5.0kb downstream 5.0kb downstream 5000 false Bd3: 2996373-3001372 Brachypodium distachyon
Bradi3g04387 10.0kb upstream 10.0kb upstream 19248 true Bd3: 3001373-3020620 Brachypodium distachyon
Bradi3g04387 10.0kb upstream 10.0kb upstream 10000 false Bd3: 3010621-3020620 Brachypodium distachyon
Bradi3g04387 10.0kb downstream 10.0kb downstream 19248 true Bd3: 2991373-3010620 Brachypodium distachyon
Bradi3g04387 10.0kb downstream 10.0kb downstream 10000 false Bd3: 2991373-3001372 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576103 5269 Grass View MSA
122047519 5273 Angiosperm View MSA
121346880 5274 Embryophyte View MSA
123428320 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.994     High  
cufflinks 15.331     High  
cufflinks 16.614     High  
cufflinks 13.817     High  
cufflinks 6.761        
cufflinks 15.198     High  
cufflinks 13.772     High  
cufflinks 12.637     High  
cufflinks 14.161     High  
cufflinks 13.066     High  
cufflinks 18.516     High  
cufflinks 14.354     High  
cufflinks 19.471     High  
cufflinks 18.514     High  
cufflinks 13.419     High  
cufflinks 15.935     High  
cufflinks 10.664        
cufflinks 0.491       Low
cufflinks 7.5        
cufflinks 2.168       Low
cufflinks 3.814        
cufflinks 17.521     High  
cufflinks 13.674     High  
cufflinks 15.533     High  
cufflinks 14.676     High  
cufflinks 16.717     High  
cufflinks 19.156     High  
cufflinks 15.961     High  
cufflinks 16.122     High  
cufflinks 4.833        

0 Strain