Gene : Bradi4g44550 B. distachyon v3.1
Defline:  (1 of 16) PTHR23155//PTHR23155:SF541 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  5744
Name:  ? Bradi4g44550 Secondary Identifier:  ? PAC:32787860
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g44550 0.5kb upstream 0.5kb upstream 6304 true Bd4: 47847113-47853416 Brachypodium distachyon
Bradi4g44550 0.5kb upstream 0.5kb upstream 500 false Bd4: 47852917-47853416 Brachypodium distachyon
Bradi4g44550 0.5kb downstream 0.5kb downstream 6304 true Bd4: 47846613-47852916 Brachypodium distachyon
Bradi4g44550 0.5kb downstream 0.5kb downstream 500 false Bd4: 47846613-47847112 Brachypodium distachyon
Bradi4g44550 1.0kb upstream 1.0kb upstream 6804 true Bd4: 47847113-47853916 Brachypodium distachyon
Bradi4g44550 1.0kb upstream 1.0kb upstream 1000 false Bd4: 47852917-47853916 Brachypodium distachyon
Bradi4g44550 1.0kb downstream 1.0kb downstream 6804 true Bd4: 47846113-47852916 Brachypodium distachyon
Bradi4g44550 1.0kb downstream 1.0kb downstream 1000 false Bd4: 47846113-47847112 Brachypodium distachyon
Bradi4g44550 2.0kb upstream 2.0kb upstream 7804 true Bd4: 47847113-47854916 Brachypodium distachyon
Bradi4g44550 2.0kb upstream 2.0kb upstream 2000 false Bd4: 47852917-47854916 Brachypodium distachyon
Bradi4g44550 2.0kb downstream 2.0kb downstream 7804 true Bd4: 47845113-47852916 Brachypodium distachyon
Bradi4g44550 2.0kb downstream 2.0kb downstream 2000 false Bd4: 47845113-47847112 Brachypodium distachyon
Bradi4g44550 5.0kb upstream 5.0kb upstream 10804 true Bd4: 47847113-47857916 Brachypodium distachyon
Bradi4g44550 5.0kb upstream 5.0kb upstream 5000 false Bd4: 47852917-47857916 Brachypodium distachyon
Bradi4g44550 5.0kb downstream 5.0kb downstream 10804 true Bd4: 47842113-47852916 Brachypodium distachyon
Bradi4g44550 5.0kb downstream 5.0kb downstream 5000 false Bd4: 47842113-47847112 Brachypodium distachyon
Bradi4g44550 10.0kb upstream 10.0kb upstream 15804 true Bd4: 47847113-47862916 Brachypodium distachyon
Bradi4g44550 10.0kb upstream 10.0kb upstream 10000 false Bd4: 47852917-47862916 Brachypodium distachyon
Bradi4g44550 10.0kb downstream 10.0kb downstream 15804 true Bd4: 47837113-47852916 Brachypodium distachyon
Bradi4g44550 10.0kb downstream 10.0kb downstream 10000 false Bd4: 47837113-47847112 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124590789 5269 Grass View MSA
122051706 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.971        
cufflinks 1.882        
cufflinks 1.884        
cufflinks 1.688        
cufflinks 0.8        
cufflinks 1.671        
cufflinks 1.382        
cufflinks 1.452        
cufflinks 1.665        
cufflinks 0.816        
cufflinks 0.323       Low
cufflinks 1.84        
cufflinks 0.459        
cufflinks 0.217       Low
cufflinks 1.104        
cufflinks 1.542        
cufflinks 0.753        
cufflinks 2.848       High
cufflinks 0.724        
cufflinks 0.101     Low Low
cufflinks 2.606       High
cufflinks 1.699        
cufflinks 1.565        
cufflinks 1.66        
cufflinks 1.425        
cufflinks 1.577        
cufflinks 0.363       Low
cufflinks 1.301        
cufflinks 1.469        
cufflinks 4.208       High

0 Strain