Gene : Bradi3g04900 B. distachyon v3.1
Defline:  (1 of 1) K13719 - ubiquitin thioesterase OTU1 (OTU1, YOD1) Genomic Order:  600
Name:  ? Bradi3g04900 Secondary Identifier:  ? PAC:32813913
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g04900 0.5kb upstream 0.5kb upstream 4366 true Bd3: 3357838-3362203 Brachypodium distachyon
Bradi3g04900 0.5kb upstream 0.5kb upstream 500 false Bd3: 3357838-3358337 Brachypodium distachyon
Bradi3g04900 0.5kb downstream 0.5kb downstream 4366 true Bd3: 3358338-3362703 Brachypodium distachyon
Bradi3g04900 0.5kb downstream 0.5kb downstream 500 false Bd3: 3362204-3362703 Brachypodium distachyon
Bradi3g04900 1.0kb upstream 1.0kb upstream 4866 true Bd3: 3357338-3362203 Brachypodium distachyon
Bradi3g04900 1.0kb upstream 1.0kb upstream 1000 false Bd3: 3357338-3358337 Brachypodium distachyon
Bradi3g04900 1.0kb downstream 1.0kb downstream 4866 true Bd3: 3358338-3363203 Brachypodium distachyon
Bradi3g04900 1.0kb downstream 1.0kb downstream 1000 false Bd3: 3362204-3363203 Brachypodium distachyon
Bradi3g04900 2.0kb upstream 2.0kb upstream 5866 true Bd3: 3356338-3362203 Brachypodium distachyon
Bradi3g04900 2.0kb upstream 2.0kb upstream 2000 false Bd3: 3356338-3358337 Brachypodium distachyon
Bradi3g04900 2.0kb downstream 2.0kb downstream 5866 true Bd3: 3358338-3364203 Brachypodium distachyon
Bradi3g04900 2.0kb downstream 2.0kb downstream 2000 false Bd3: 3362204-3364203 Brachypodium distachyon
Bradi3g04900 5.0kb upstream 5.0kb upstream 8866 true Bd3: 3353338-3362203 Brachypodium distachyon
Bradi3g04900 5.0kb upstream 5.0kb upstream 5000 false Bd3: 3353338-3358337 Brachypodium distachyon
Bradi3g04900 5.0kb downstream 5.0kb downstream 8866 true Bd3: 3358338-3367203 Brachypodium distachyon
Bradi3g04900 5.0kb downstream 5.0kb downstream 5000 false Bd3: 3362204-3367203 Brachypodium distachyon
Bradi3g04900 10.0kb upstream 10.0kb upstream 13866 true Bd3: 3348338-3362203 Brachypodium distachyon
Bradi3g04900 10.0kb upstream 10.0kb upstream 10000 false Bd3: 3348338-3358337 Brachypodium distachyon
Bradi3g04900 10.0kb downstream 10.0kb downstream 13866 true Bd3: 3358338-3372203 Brachypodium distachyon
Bradi3g04900 10.0kb downstream 10.0kb downstream 10000 false Bd3: 3362204-3372203 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569621 5269 Grass View MSA
122046032 5273 Angiosperm View MSA
121345268 5274 Embryophyte View MSA
123424822 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.189        
cufflinks 6.16        
cufflinks 5.855        
cufflinks 7.844        
cufflinks 6.409        
cufflinks 5.395        
cufflinks 5.424        
cufflinks 4.622        
cufflinks 5.067        
cufflinks 6.603        
cufflinks 2.359       Low
cufflinks 5.154        
cufflinks 2.051       Low
cufflinks 2.146       Low
cufflinks 4.245        
cufflinks 5.552        
cufflinks 8.581       High
cufflinks 8.89       High
cufflinks 9.216       High
cufflinks 8.377       High
cufflinks 8.863       High
cufflinks 4.669        
cufflinks 4.182        
cufflinks 4.798        
cufflinks 5.7        
cufflinks 8.371       High
cufflinks 2.464       Low
cufflinks 5.963        
cufflinks 6.081        
cufflinks 8.675       High

0 Strain