Gene : Bradi3g04860 B. distachyon v3.1
Defline:  (1 of 1) PTHR11214//PTHR11214:SF120 - BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  596
Name:  ? Bradi3g04860 Secondary Identifier:  ? PAC:32822027
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g04860 0.5kb upstream 0.5kb upstream 5365 true Bd3: 3341441-3346805 Brachypodium distachyon
Bradi3g04860 0.5kb upstream 0.5kb upstream 500 false Bd3: 3341441-3341940 Brachypodium distachyon
Bradi3g04860 0.5kb downstream 0.5kb downstream 5365 true Bd3: 3341941-3347305 Brachypodium distachyon
Bradi3g04860 0.5kb downstream 0.5kb downstream 500 false Bd3: 3346806-3347305 Brachypodium distachyon
Bradi3g04860 1.0kb upstream 1.0kb upstream 5865 true Bd3: 3340941-3346805 Brachypodium distachyon
Bradi3g04860 1.0kb upstream 1.0kb upstream 1000 false Bd3: 3340941-3341940 Brachypodium distachyon
Bradi3g04860 1.0kb downstream 1.0kb downstream 5865 true Bd3: 3341941-3347805 Brachypodium distachyon
Bradi3g04860 1.0kb downstream 1.0kb downstream 1000 false Bd3: 3346806-3347805 Brachypodium distachyon
Bradi3g04860 2.0kb upstream 2.0kb upstream 6865 true Bd3: 3339941-3346805 Brachypodium distachyon
Bradi3g04860 2.0kb upstream 2.0kb upstream 2000 false Bd3: 3339941-3341940 Brachypodium distachyon
Bradi3g04860 2.0kb downstream 2.0kb downstream 6865 true Bd3: 3341941-3348805 Brachypodium distachyon
Bradi3g04860 2.0kb downstream 2.0kb downstream 2000 false Bd3: 3346806-3348805 Brachypodium distachyon
Bradi3g04860 5.0kb upstream 5.0kb upstream 9865 true Bd3: 3336941-3346805 Brachypodium distachyon
Bradi3g04860 5.0kb upstream 5.0kb upstream 5000 false Bd3: 3336941-3341940 Brachypodium distachyon
Bradi3g04860 5.0kb downstream 5.0kb downstream 9865 true Bd3: 3341941-3351805 Brachypodium distachyon
Bradi3g04860 5.0kb downstream 5.0kb downstream 5000 false Bd3: 3346806-3351805 Brachypodium distachyon
Bradi3g04860 10.0kb upstream 10.0kb upstream 14865 true Bd3: 3331941-3346805 Brachypodium distachyon
Bradi3g04860 10.0kb upstream 10.0kb upstream 10000 false Bd3: 3331941-3341940 Brachypodium distachyon
Bradi3g04860 10.0kb downstream 10.0kb downstream 14865 true Bd3: 3341941-3356805 Brachypodium distachyon
Bradi3g04860 10.0kb downstream 10.0kb downstream 10000 false Bd3: 3346806-3356805 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571186 5269 Grass View MSA
122042482 5273 Angiosperm View MSA
121348547 5274 Embryophyte View MSA
123427932 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.277       High
cufflinks 4.146        
cufflinks 4.129        
cufflinks 4.859        
cufflinks 6.28        
cufflinks 4.612        
cufflinks 3.619        
cufflinks 6.389        
cufflinks 5.491        
cufflinks 3.78        
cufflinks 1.746       Low
cufflinks 6.188        
cufflinks 2.763       Low
cufflinks 1.883       Low
cufflinks 11.417     High High
cufflinks 4.158        
cufflinks 5.989        
cufflinks 7.409       High
cufflinks 3.971        
cufflinks 1.162       Low
cufflinks 9.824       High
cufflinks 4.48        
cufflinks 6.13        
cufflinks 6.158        
cufflinks 4.886        
cufflinks 4.099        
cufflinks 2.302       Low
cufflinks 3.551        
cufflinks 4.025        
cufflinks 8.841       High

0 Strain