Gene : Bradi3g05286 B. distachyon v3.1
Defline:  (1 of 1) PF01464 - Transglycosylase SLT domain (SLT) Genomic Order:  651
Name:  ? Bradi3g05286 Secondary Identifier:  ? PAC:32813685
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g05286 0.5kb upstream 0.5kb upstream 9225 true Bd3: 3698103-3707327 Brachypodium distachyon
Bradi3g05286 0.5kb upstream 0.5kb upstream 500 false Bd3: 3706828-3707327 Brachypodium distachyon
Bradi3g05286 0.5kb downstream 0.5kb downstream 9225 true Bd3: 3697603-3706827 Brachypodium distachyon
Bradi3g05286 0.5kb downstream 0.5kb downstream 500 false Bd3: 3697603-3698102 Brachypodium distachyon
Bradi3g05286 1.0kb upstream 1.0kb upstream 9725 true Bd3: 3698103-3707827 Brachypodium distachyon
Bradi3g05286 1.0kb upstream 1.0kb upstream 1000 false Bd3: 3706828-3707827 Brachypodium distachyon
Bradi3g05286 1.0kb downstream 1.0kb downstream 9725 true Bd3: 3697103-3706827 Brachypodium distachyon
Bradi3g05286 1.0kb downstream 1.0kb downstream 1000 false Bd3: 3697103-3698102 Brachypodium distachyon
Bradi3g05286 2.0kb upstream 2.0kb upstream 10725 true Bd3: 3698103-3708827 Brachypodium distachyon
Bradi3g05286 2.0kb upstream 2.0kb upstream 2000 false Bd3: 3706828-3708827 Brachypodium distachyon
Bradi3g05286 2.0kb downstream 2.0kb downstream 10725 true Bd3: 3696103-3706827 Brachypodium distachyon
Bradi3g05286 2.0kb downstream 2.0kb downstream 2000 false Bd3: 3696103-3698102 Brachypodium distachyon
Bradi3g05286 5.0kb upstream 5.0kb upstream 13725 true Bd3: 3698103-3711827 Brachypodium distachyon
Bradi3g05286 5.0kb upstream 5.0kb upstream 5000 false Bd3: 3706828-3711827 Brachypodium distachyon
Bradi3g05286 5.0kb downstream 5.0kb downstream 13725 true Bd3: 3693103-3706827 Brachypodium distachyon
Bradi3g05286 5.0kb downstream 5.0kb downstream 5000 false Bd3: 3693103-3698102 Brachypodium distachyon
Bradi3g05286 10.0kb upstream 10.0kb upstream 18725 true Bd3: 3698103-3716827 Brachypodium distachyon
Bradi3g05286 10.0kb upstream 10.0kb upstream 10000 false Bd3: 3706828-3716827 Brachypodium distachyon
Bradi3g05286 10.0kb downstream 10.0kb downstream 18725 true Bd3: 3688103-3706827 Brachypodium distachyon
Bradi3g05286 10.0kb downstream 10.0kb downstream 10000 false Bd3: 3688103-3698102 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026274 5273 Angiosperm View MSA
124578354 5269 Grass View MSA
121350872 5274 Embryophyte View MSA
123381917 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.217        
cufflinks 0.235        
cufflinks 0.226        
cufflinks 0.235        
cufflinks 0.281        
cufflinks 0.204        
cufflinks 0.234        
cufflinks 0.198        
cufflinks 0.219        
cufflinks 0.189        
cufflinks 0.01     Low Low
cufflinks 0.284        
cufflinks 0.013     Low Low
cufflinks 0.007     Low Low
cufflinks 0.186        
cufflinks 0.192        
cufflinks 0.193        
cufflinks 0.153        
cufflinks 0.247        
cufflinks 0.042     Low Low
cufflinks 0.414        
cufflinks 0.262        
cufflinks 0.305        
cufflinks 0.267        
cufflinks 0.205        
cufflinks 0.258        
cufflinks 0.02     Low Low
cufflinks 0.201        
cufflinks 0.214        
cufflinks 0.574       High

0 Strain