Gene : Bradi3g01150 B. distachyon v3.1
Defline:  (1 of 1) K05286 - phosphatidylinositol glycan, class B (PIGB) Genomic Order:  121
Name:  ? Bradi3g01150 Secondary Identifier:  ? PAC:32821402
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g01150 0.5kb upstream 0.5kb upstream 5463 true Bd3: 743171-748633 Brachypodium distachyon
Bradi3g01150 0.5kb upstream 0.5kb upstream 500 false Bd3: 743171-743670 Brachypodium distachyon
Bradi3g01150 0.5kb downstream 0.5kb downstream 5463 true Bd3: 743671-749133 Brachypodium distachyon
Bradi3g01150 0.5kb downstream 0.5kb downstream 500 false Bd3: 748634-749133 Brachypodium distachyon
Bradi3g01150 1.0kb upstream 1.0kb upstream 5963 true Bd3: 742671-748633 Brachypodium distachyon
Bradi3g01150 1.0kb upstream 1.0kb upstream 1000 false Bd3: 742671-743670 Brachypodium distachyon
Bradi3g01150 1.0kb downstream 1.0kb downstream 5963 true Bd3: 743671-749633 Brachypodium distachyon
Bradi3g01150 1.0kb downstream 1.0kb downstream 1000 false Bd3: 748634-749633 Brachypodium distachyon
Bradi3g01150 2.0kb upstream 2.0kb upstream 6963 true Bd3: 741671-748633 Brachypodium distachyon
Bradi3g01150 2.0kb upstream 2.0kb upstream 2000 false Bd3: 741671-743670 Brachypodium distachyon
Bradi3g01150 2.0kb downstream 2.0kb downstream 6963 true Bd3: 743671-750633 Brachypodium distachyon
Bradi3g01150 2.0kb downstream 2.0kb downstream 2000 false Bd3: 748634-750633 Brachypodium distachyon
Bradi3g01150 5.0kb upstream 5.0kb upstream 9963 true Bd3: 738671-748633 Brachypodium distachyon
Bradi3g01150 5.0kb upstream 5.0kb upstream 5000 false Bd3: 738671-743670 Brachypodium distachyon
Bradi3g01150 5.0kb downstream 5.0kb downstream 9963 true Bd3: 743671-753633 Brachypodium distachyon
Bradi3g01150 5.0kb downstream 5.0kb downstream 5000 false Bd3: 748634-753633 Brachypodium distachyon
Bradi3g01150 10.0kb upstream 10.0kb upstream 14963 true Bd3: 733671-748633 Brachypodium distachyon
Bradi3g01150 10.0kb upstream 10.0kb upstream 10000 false Bd3: 733671-743670 Brachypodium distachyon
Bradi3g01150 10.0kb downstream 10.0kb downstream 14963 true Bd3: 743671-758633 Brachypodium distachyon
Bradi3g01150 10.0kb downstream 10.0kb downstream 10000 false Bd3: 748634-758633 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568252 5269 Grass View MSA
122042871 5273 Angiosperm View MSA
121346274 5274 Embryophyte View MSA
123425289 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.16        
cufflinks 1.362        
cufflinks 1.513        
cufflinks 1.696        
cufflinks 0.851        
cufflinks 1.268        
cufflinks 1.155        
cufflinks 1.26        
cufflinks 1.238        
cufflinks 1.326        
cufflinks 0.635        
cufflinks 1.165        
cufflinks 0.477       Low
cufflinks 0.506       Low
cufflinks 0.757        
cufflinks 1.265        
cufflinks 1.103        
cufflinks 2.76       High
cufflinks 1.521        
cufflinks 0.201       Low
cufflinks 1.738        
cufflinks 1.437        
cufflinks 1.135        
cufflinks 1.246        
cufflinks 1.343        
cufflinks 2.002       High
cufflinks 0.562       Low
cufflinks 1.538        
cufflinks 1.453        
cufflinks 2.06       High

0 Strain