Gene : Bradi3g01297 B. distachyon v3.1
Defline:  (1 of 1) PTHR10799:SF577 - PROTEIN TAF-3, ISOFORM A Genomic Order:  136
Name:  ? Bradi3g01297 Secondary Identifier:  ? PAC:32812203
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g01297 0.5kb upstream 0.5kb upstream 13451 true Bd3: 830922-844372 Brachypodium distachyon
Bradi3g01297 0.5kb upstream 0.5kb upstream 500 false Bd3: 843873-844372 Brachypodium distachyon
Bradi3g01297 0.5kb downstream 0.5kb downstream 13451 true Bd3: 830422-843872 Brachypodium distachyon
Bradi3g01297 0.5kb downstream 0.5kb downstream 500 false Bd3: 830422-830921 Brachypodium distachyon
Bradi3g01297 1.0kb upstream 1.0kb upstream 13951 true Bd3: 830922-844872 Brachypodium distachyon
Bradi3g01297 1.0kb upstream 1.0kb upstream 1000 false Bd3: 843873-844872 Brachypodium distachyon
Bradi3g01297 1.0kb downstream 1.0kb downstream 13951 true Bd3: 829922-843872 Brachypodium distachyon
Bradi3g01297 1.0kb downstream 1.0kb downstream 1000 false Bd3: 829922-830921 Brachypodium distachyon
Bradi3g01297 2.0kb upstream 2.0kb upstream 14951 true Bd3: 830922-845872 Brachypodium distachyon
Bradi3g01297 2.0kb upstream 2.0kb upstream 2000 false Bd3: 843873-845872 Brachypodium distachyon
Bradi3g01297 2.0kb downstream 2.0kb downstream 14951 true Bd3: 828922-843872 Brachypodium distachyon
Bradi3g01297 2.0kb downstream 2.0kb downstream 2000 false Bd3: 828922-830921 Brachypodium distachyon
Bradi3g01297 5.0kb upstream 5.0kb upstream 17951 true Bd3: 830922-848872 Brachypodium distachyon
Bradi3g01297 5.0kb upstream 5.0kb upstream 5000 false Bd3: 843873-848872 Brachypodium distachyon
Bradi3g01297 5.0kb downstream 5.0kb downstream 17951 true Bd3: 825922-843872 Brachypodium distachyon
Bradi3g01297 5.0kb downstream 5.0kb downstream 5000 false Bd3: 825922-830921 Brachypodium distachyon
Bradi3g01297 10.0kb upstream 10.0kb upstream 22951 true Bd3: 830922-853872 Brachypodium distachyon
Bradi3g01297 10.0kb upstream 10.0kb upstream 10000 false Bd3: 843873-853872 Brachypodium distachyon
Bradi3g01297 10.0kb downstream 10.0kb downstream 22951 true Bd3: 820922-843872 Brachypodium distachyon
Bradi3g01297 10.0kb downstream 10.0kb downstream 10000 false Bd3: 820922-830921 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572444 5269 Grass View MSA
122044493 5273 Angiosperm View MSA
121349128 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.012        
cufflinks 17.609     High  
cufflinks 19.131     High  
cufflinks 10.274        
cufflinks 4.905       Low
cufflinks 16.167     High  
cufflinks 14.755     High  
cufflinks 12.915     High  
cufflinks 15.927     High  
cufflinks 7.399        
cufflinks 15.334     High  
cufflinks 18.417     High  
cufflinks 12.858     High  
cufflinks 9.281     High  
cufflinks 8.041        
cufflinks 16.044     High  
cufflinks 4.261       Low
cufflinks 18.736     High  
cufflinks 7.756        
cufflinks 2.625       Low
cufflinks 6.492        
cufflinks 20.601     High High
cufflinks 13.528     High  
cufflinks 11.822     High  
cufflinks 9.866     High  
cufflinks 14.856     High  
cufflinks 12.291     High  
cufflinks 14.987     High  
cufflinks 14.519     High  
cufflinks 17.122     High  

0 Strain